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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c5cg0B_

Fold library idPDB HeaderMoleculeTitle
c5cg0B_PDB header: hydrolaseChain: B: PDB Molecule: beta-glucosidase;PDBTitle: crystal structure of spodoptera frugiperda beta-glycosidase


Added to library: Sat Dec 12 08:22:39 2015
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence QRRFPDDFLFGTATASYQIEGAWDEDGKGENIWDYMVHNTPEVIRDLSNGDIAADSYHNYKRDVEMMREL
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Known secondary structure (DSSP)




TT





TTSTT


B
GGGSTTS

SSSTT
 .........80.........90.........100.........110.........120.........130.........140
Sequence GLDAYRFSLSWARILPTGMANEVNPAGIAFYNNYIDEMLKYNITPLITLYHWDLPQKLQELGGFANPLIS
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Known secondary structure (DSSP) T
S

STTSSTT


TT
SS

BTTGGGSTT
 .........150.........160.........170.........180.........190.........200.........210
Sequence DWFEDYARVVFENFGDRVKMFITFNEPREICFEGYGSATKAPILNATAMGAYLCAKNLVTAHAKAYYLYD
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Known secondary structure (DSSP) TTT


TTTTSSSSSTT



TTT
 .........220.........230.........240.........250.........260.........270.........280
Sequence REFRPVQGGQCGITISVNWFGPATPTPEDEMAAELRRQGEWGIYAHPIFSAEGGFPKELSDKIAEKSAQQ
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Known secondary structure (DSSP) T



SSSSTSSS
SS
T
 .........290.........300.........310.........320.........330.........340.........350
Sequence GYPWSRLPEFTEEEKAFVRGTSDFFGVNHYTAFLVSATERKGPYPVPSLLDDVDTGSWADDSWLKSASAW
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Known secondary structure (DSSP) T
SS
SS



TT

SS


SSS





SS
T


TTS
B
SSTT
 .........360.........370.........380.........390.........400.........410.........420
Sequence LTLAPNSIHTALTHLNNLYNKPVFYITENGWSTDESRENSLIDDDRIQYYRASMESLLNCLDDGINLKGY
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Known secondary structure (DSSP)
B

TTTTS




TT
TTTT

TT

 .........430.........440.........450.........460.........470.........480........
Sequence MAWSLMDNFEWMEGYIERFGLYEVDFSDPARTRTPRKAAFVYKHIIKHRVVDYEYEPETMVMTIDEGH
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Known secondary structure (DSSP)
SB



GGGTTS

S
TTSTT


SS

TT


S
SS



TT


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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