Standard Mode | Switch to Expert Mode | Login to view past jobsRetrieve Phyre Job Id
 
Subscribe to Phyre at Google Groups
Email:
Visit Phyre at Google Groups
 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c5cfdA_

Fold library idPDB HeaderMoleculeTitle
c5cfdA_2.50PDB header: virusChain: A: PDB Molecule: vp1;


Added to library: Sat Jun 18 08:17:38 2016
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence GVDNAEKGKVSDDNASTDFVAEPVKLPENQTRVSFFYDRSTLSSVLQSTSDVSSKFTPSTAKNLQNSILL
Predicted secondary structure
























































SS confidence





































































Known secondary structure (DSSP)



GGGS





TTTTSS








TTSSS

S
SSS




TTS
 .........80.........90.........100.........110.........120.........130.........140
Sequence TPLPSDIVNNSVLPEQERWISFASPTTQKPPYKTKQDWNFIMFSPFTYYKCDLEVTLSKNDRETISSVVR
Predicted secondary structure







































SS confidence





































































Known secondary structure (DSSP)
SS


TT
SS

SS

BSSSSS

S
BSSB

S

SS
S

 .........150.........160.........170.........180.........190.........200.........210
Sequence YVPCGAPSDLSDQTMPQTPSLADTRDPHMWVVGQGTTNQISFVIPYTSPLSVLPSVWFNGFSNFDNSSRF
Predicted secondary structure














































SS confidence





































































Known secondary structure (DSSP)
TT







SSTTS
GGGSSSS
STTS
S



SSSSSS
B
S
SSTTS
S
T
 .........220.........230.........240.........250..
Sequence GVAPNADFGRLLLQGQGTFSVHYRYKKMRVFCPRPTVFIPWP
Predicted secondary structure





















SS confidence









































Known secondary structure (DSSP) B

TT
SS
SS









Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


Phyre is now FREE for commercial users!

All images and data generated by Phyre2 are free to use in any publication with acknowledgement

Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
© Structural Bioinformatics Group, Imperial College, London
Michael Sternberg 
Disclaimer
Terms and Conditions
Structural Biology Group logo Imperial logo
BBSRC logo
Phyre2 is part of Genome3D