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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c5cerI_

Fold library idPDB HeaderMoleculeTitle
c5cerI_PDB header: immune systemChain: I: PDB Molecule: bd0816;PDBTitle: bd0816 predatory endopeptidase from bdellovibrio bacteriovorus in2 complex with immunity protein bd3460


Added to library: Sat Dec 12 08:18:48 2015
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence MVYVNSVCHMKAAATAGKVEGEGDMQKKFPLAAISKVITTLWAIEKLGVDYRHKTVLHLTPTANGSMDLH
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 .........80.........90.........100.........110.........120.........130.........140
Sequence VEGSRDPIFGRNLSYFLISELNRMKVTKIENLTFDENFLLDWLAEESPRIGGVTPRYETIEQQAEAVIKN
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TT
STT


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SS
 .........150.........160.........170.........180.........190.........200.........210
Sequence LKESFSTAINRAMYSKLRERATKAKVFMLEKPTIEVRNISFLPKNNYKKDKYTGSVVLQSAPLRTILKRM
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Known secondary structure (DSSP) TTTS


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S
 .........220.........230.........240.........250.........260.........270.........280
Sequence NNQSNNYIADNLYWNLGGTAAFNAFAAATLKADQNQIVFHNGSGNNEGTTAKPIYNEATCETMIKTLYTL
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TTS


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 .........290.........300.........310.........320.........330.........340.........350
Sequence NKSLEAKGYKLSDVLSVANKDSDSTIDNFGGNAAGSMIAKTGTVNKAKTLAGSISTKEGEFYFAILLHTD
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Known secondary structure (DSSP) TT

GGGTSTTT
SSSTTTT

STTTTTTTTT

 .........360.........370.........380.........390.........400.
Sequence MDQSSSDRGVASQMIKNKISQLINKRSGPKEIQYTEILALPFDQNSYLTEA
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Known secondary structure (DSSP) TTT
TTTTSB










S

TT
S


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Michael Sternberg 
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