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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c5ce6A_

Fold library idPDB HeaderMoleculeTitle
c5ce6A_1.70PDB header: transcriptionChain: A: PDB Molecule: fact-spt16;


Added to library: Sat Apr 16 08:23:12 2016
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence SIDLNTFQTRLKAFYSHWDDRRTDLWGSSDAIAVACPPPSRYLKSTALFLWLLGFEFPETIMVFTKKQIH
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Known secondary structure (DSSP)


TTTTTSTT
S
S




SS

TT
SS
 .........80.........90.........100.........110.........120.........130.........140
Sequence VLCSQKKASILESVKKPARESVGVEIILHVKPKNDDGASSMDAIIRAIRAQSSSTVGHIAREEPEGRLLD
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Known secondary structure (DSSP)
GGG



TT







TT



S
 .........150.........160.........170.........180.........190.........200.........210
Sequence LWAEKLKNSKFRLSDVANGFSALFAAKSNEEITYIKRAAYLTGSVMKNFVVTKLENVIDEEKKILHSTLM
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Known secondary structure (DSSP) SS

S

TTT


B
 .........220.........230.........240.........250.........260.........270.........280
Sequence EETEKVILDPAKVNCKLKADNVDICYPPIFQSGGKFDLRPSAVSNDEALYYDSASVIICAVGARYKSYCS
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Known secondary structure (DSSP) SGGGGT



GGGSS

TT



STT



SSB


SSS
TT
 .........290.........300.........310.........320.........330.........340.........350
Sequence NIARTFLIDADPIQSKAYEVLLKAQEAVIGSLKPGNKLSAAYLAAVSVVEKDAPDMVSCLTKSAGTGIGI
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Known secondary structure (DSSP)
S



TT
B
GGGGGGB
SB

SS
 .........360.........370.........380.........390.........400.........410.........420
Sequence EFRESGLNINAKNDQIVKEGMVFNVSLGFQNLHCENSKSKNKVFSLLLADTIIINKDKTDVVTSIGSKAL
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Known secondary structure (DSSP) SS
BGGG

BTT


B

TT

S
TTSTTS
SS
TT

S

S
 ......
Sequence KDVAYS
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Known secondary structure (DSSP)


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Michael Sternberg 
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