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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c5cawA_

Fold library idPDB HeaderMoleculeTitle
c5cawA_PDB header: signaling proteinChain: A: PDB Molecule: e3 ubiquitin-protein ligase parkin;PDBTitle: structure of pediculus humanus parkin bound to phospho-ubiquitin


Added to library: Sat Jul 25 08:25:23 2015
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence NKAHFFIYCANPCKKINTGKLRVCCSECKHGAFTVDTDPQSWADVLDKNKITGVCNNVGCEGLYAKFYFK
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Known secondary structure (DSSP)




TTTT
TTT

S
SS


SSSS

B
STT



B
 .........80.........90.........100.........110.........120.........130.........140
Sequence CASHPSQGENDTAVPLNLIKRNHKKIPCLACTDICDPVLVFSCDNRHVTCLECFKNYCGSRLKDRQFLSH
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Known secondary structure (DSSP) SSS


STT

B
TT

TT



TTT



SS

STT
BTT
S
 .........150.........160.........170.........180.........190.........200.........210
Sequence PDFGYTLPCPAGCSNSFIEEVHHFRLLTDAQYEQYHRFATEEFILQAGGVLCPQPGCGQGILIDQNCNRV
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Known secondary structure (DSSP) TTT


TT

TT




GGGGGGS
TT



SS





TT

 .........220.........230.........240.........250.........260.........270.........280
Sequence QCSCGYVFCGKCLEGFHLGECLNPLDPEKLEKARWDVLTKPCPKCRTSTERAGGCMHMICTRANCGFHWC
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Known secondary structure (DSSP)
TTS
TTT
SB

SSS





SB





TTT




SSB


SSS


 .........290........
Sequence WVCQGPWERDCMASHWFG
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Known secondary structure (DSSP) TTTT

SB


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Michael Sternberg 
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