Standard Mode | Switch to Expert Mode | Login to view past jobsRetrieve Phyre Job Id
 
Subscribe to Phyre at Google Groups
Email:
Visit Phyre at Google Groups
 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c5cagA_

Fold library idPDB HeaderMoleculeTitle
c5cagA_PDB header: cell adhesionChain: A: PDB Molecule: uncharacterized protein;PDBTitle: crystal structure of a putative adhesin (bacova_02677) from2 bacteroides ovatus atcc 8483 at 3.00 a resolution (psi community3 target, nakayama)


Added to library: Sat Oct 17 08:22:18 2015
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence GXLTGCSRRDILDDYPVSGVDIKLDWDGVTDQLPEGVRVIFYPKNGDGRKVDKYLSVRGGEXKVPPGRYS
Predicted secondary structure









































SS confidence





































































Known secondary structure (DSSP)








TTSSSS




TTT
SS

SSSSSS

TT


S
 .........80.........90.........100.........110.........120.........130.........140
Sequence VVVYNYNTESIRIRGEESYETIEAYTGNCNGLGIEGTEKXVWSPDSLYVLNIDELKIEKSEEVLRLDWKL
Predicted secondary structure



























SS confidence





































































Known secondary structure (DSSP)


SS
TTSGGG

B

S
SSTTGGGSB








SS

 .........150.........160.........170.........180.........190.........200.........210
Sequence ESVVKKYSFAVEAKGLEYVATVVGSIDGLSDCYCIGKGRGVCSSQPIYFEVKKGDNKVTAFFTAFKQVKE
Predicted secondary structure































SS confidence





































































Known secondary structure (DSSP)

GGGSSB
TTTT

S


SS
SB

 .........220.........230.........240.........250.........260.........270.........280
Sequence XTXPTRXSTSERETSSEKGAIILILKFIKTDNTVQEATIDVTEIIGTLENKPTPPPEIELPPDDKIEVDK
Predicted secondary structure






































SS confidence





































































Known secondary structure (DSSP)


SS



S




SSSS

TTS

GGGB









GGG



 ....
Sequence PETP
Predicted secondary structure


SS confidence



Known secondary structure (DSSP)




Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


Phyre is now FREE for commercial users!

All images and data generated by Phyre2 are free to use in any publication with acknowledgement

Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
© Structural Bioinformatics Group, Imperial College, London
Michael Sternberg 
Disclaimer
Terms and Conditions
Structural Biology Group logo Imperial logo
BBSRC logo
Phyre2 is part of Genome3D