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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c5cadA_

Fold library idPDB HeaderMoleculeTitle
c5cadA_1.49PDB header: plant proteinChain: A: PDB Molecule: sm80.1 vicilin;


Added to library: Sat Apr 9 08:34:33 2016
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence QQESNVPYLFKVVRFKSRFRASHGDFRILPKFVQRSQLLRGIEKFRVSVIELEPQSFMLPHHCDGEAIFV
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Known secondary structure (DSSP)

GGG
TT
GGG
SS

TT


TTSS
GGGGGGTT
SSS
 .........80.........90.........100.........110.........120.........130.........140
Sequence VVKGQGVIVIAEQDKNNSFNLQKGDVLRLHGGSTIFLLNADANEKFKVYVLAKSVNAPGEVQEYFSAGGQ
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Known secondary structure (DSSP) S
SS
TT

TT


SS

SSSTT


SS
BT
 .........150.........160.........170.........180.........190.........200.........210
Sequence NPESFYRAFVVDILESAFNVKRDKIERLFSQQKAGAIISASGAQAAAKAGHASAAGGAAAAARVAGPFNL
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Known secondary structure (DSSP) TTB
GGGGS
TS
TTS

S
S

TT
BSS



S
SSS


B

 .........220.........230.........240.........250.........260.........270.........280
Sequence MKEVPEFGSAFGQFQEAAPQRHVQLRDLDAAVAFMNINSGGMVLPYYNSRSTRVVAVVEGNARFEMACPH
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Known secondary structure (DSSP) TTS

STT
TTT
GGGTTTT
TTSS
S
 .........290.........300.........310.........320.........330.........340.........350
Sequence LGAAVVHYAKVRGNLNVGDVLVIPAGHPITFVAVAGSDFRVVGFGIDAEHNKKNFLAGKQNIWRNIDREA
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Known secondary structure (DSSP)






TT

TT

SSS
S
TT

SSSSSSGGGGS
 .........360.........370.........
Sequence KELSFDMPGAEVEEIFAKQILSYFVAGPA
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Known secondary structure (DSSP) TS
S



S



Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Michael Sternberg 
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