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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c5c9pA_

Fold library idPDB HeaderMoleculeTitle
c5c9pA_1.75PDB header: sugar binding proteinChain: A: PDB Molecule: pll lectin;


Added to library: Thu Feb 9 17:39:20 2017
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence IENSAIALSGIVSVANNADNRLEVFGVSTDSAVWHNWQTAPLPNSSWAGWNKFNGVVTSKPAVHRNSDGR
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Known secondary structure (DSSP)

TT




BS

TT

TTSBSSSSTT

B


B
S


TTS
 .........80.........90.........100.........110.........120.........130.........140
Sequence LEVFVRGTDNALWHNWQTAADTNTWSSWQPLYGGITSNPEVCLNSDGRLEVFVRGSDNALWHIWQTAAHT
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Known secondary structure (DSSP) BTTSSBSSTT
S
B




B
S


TTS
BTTSSBSSTTS
 .........150.........160.........170.........180.........190.........200.........210
Sequence NSWSNWKSLGGTLTSNPAAHLNADGRIEVFARGADNALWHIWQTAAHTDQWSNWQSLKSVITSDPVVINN
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Known secondary structure (DSSP) S
B






BSS


TTS
BTTS
BSSTTSS
B


S
BSS


 .........220.........230.........240.........250.........260.........270.........280
Sequence CDGRLEVFARGADSTLRHISQIGSDSVSWSNWQCLDGVITSAPAAVKNISGQLEVFARGADNTLWRTWQT
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Known secondary structure (DSSP) TTS
BTTSB

TT


B


B
S


TTS
BTTSBS
 .........290.........300.........310.........320.........330.........340.........350
Sequence SHNGPWSNWSSFTGIIASAPTVAKNSDGRIEVFVLGLDKALWHLWQTTSSTTSSWTTWALIGGITLIDAS
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Known secondary structure (DSSP) STT

B



SSB

TTS

TTSSBSSSSTT

B



S




 ....
Sequence VILE
Predicted secondary structure
SS confidence



Known secondary structure (DSSP)




Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Michael Sternberg 
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