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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c5c7rA_

Fold library idPDB HeaderMoleculeTitle
c5c7rA_PDB header: antifreeze proteinChain: A: PDB Molecule: fusion protein of maltose-binding periplasmic protein andPDBTitle: revealing surface waters on an antifreeze protein by fusion protein2 crystallography


Added to library: Sat Oct 3 09:29:39 2015
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence KIEEGKLVIWINGDKGYNGLAEVGKKFEKDTGIKVTVEHPDKLEEKFPQVAATGDGPDIIFWAHDRFGGY
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Known secondary structure (DSSP)


TT

TTS




TTTTT
S
SGGG
 .........80.........90.........100.........110.........120.........130.........140
Sequence AQSGLLAEITPDKAFQDKLYPFTWDAVRYNGKLIAYPIAVEALSLIYNKDLLPNPPKTWEEIPALDKELK
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Known secondary structure (DSSP) TT
B





TTB
TTT
S

TTT
SS

SBGGG
 .........150.........160.........170.........180.........190.........200.........210
Sequence AKGKSALMFNLQEPYFTWPLIAADGGYAFKYENGKYDIKDVGVDNAGAKAGLTFLVDLIKNKHMNADTDY
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Known secondary structure (DSSP) TT




SSTT
TTTTSTTSS
TT

 .........220.........230.........240.........250.........260.........270.........280
Sequence SIAEAAFNKGETAMTINGPWAWSNIDTSKVNYGVTVLPTFKGQPSKPFVGVLSAGINAASPNKELAKEFL
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Known secondary structure (DSSP) TT

GGGT




TT


BTT
S
 .........290.........300.........310.........320.........330.........340.........350
Sequence ENYLLTDEGLEAVNKDKPLGAVALKSYEEELAKDPRIAATMENAQKGEIMPNIPQMSAFWYAVRTAVINA
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Known secondary structure (DSSP) TTSSS


SBTTSS


STT
 .........360.........370.........380.........390.........400.........410.........420
Sequence ASGRQTVDAALAAAQTNAAANQASVVANQLIPINTALTLVMMRSEVVTPVGIPAEDIPRLVSMQVNRAVP
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Known secondary structure (DSSP) TSS
TS


SS
B
TT
B

GGG

SS

SBGGGTT
BBSS
B
 .........430.....
Sequence LGTTLMPDMVKGYAA
Predicted secondary structure




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Known secondary structure (DSSP) TT
B

GGGBTTTT


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Michael Sternberg 
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