PHYRE Protein Fold Recognition Server

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Protein Homology/analogY Recognition Engine V 2.0

Fold library entry viewer: c5c7eB_

Fold library id	PDB Header	Molecule	Title
c5c7eB_	PDB header: transcription	Chain: B: PDB Molecule: aspr2 protein;	PDBTitle: crystal structure of the rice topless related protein 2 (tpr2) n-2 terminal domain (1-209) in complex with arabidopsis iaa10 peptide

Links to external resources
Added to library: Sat Aug 8 08:22:01 2015

1 . . . . . . . . 10 . . . . . . . . . 20 . . . . . . . . . 30 . . . . . . . . . 40 . . . . . . . . . 50 . . . . . . . . . 60 . . . . . . . . . 70

Sequence M S S L S R E L V F L I L Q F L D E E K F K E T V H K L E Q E S G F F F N M K Y F E E K V H A G E W D E V E K Y L S G F T K V D D N R Y S M

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
T T
S
T T
T T T
T T S

. . . . . . . . . 80 . . . . . . . . . 90 . . . . . . . . . 100 . . . . . . . . . 110 . . . . . . . . . 120 . . . . . . . . . 130 . . . . . . . . . 140

Sequence K I F F E I R K Q K Y L E A L D R H D R A K A V D I L V K D L K V F S T F N E E L Y K E I T Q L L T L E N F R E N E Q L S K Y G D T K S A R

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T T
T S G G G T T T
G G G G S S
G G G S T T S T T

. . . . . . . . . 150 . . . . . . . . . 160 . . . . . . . . . 170 . . . . . . . . . 180 . . . . . . . . . 190 . . . . . . . . . 200 . . . . .

Sequence S I M L I E L K K L I E A N P L F R E K L V F P T L K A S R L R T L I N Q S L N W Q H Q L C K N P R P N P D I K T L F T D H T C T

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
T T T T T S S S
T T T
S S
S S
S S S

Download: PDB structure FASTA sequence
Hidden Markov model

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Please cite: The Phyre2 web portal for protein modeling, prediction and analysis

Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]

© Structural Bioinformatics Group, Imperial College, London

Michael Sternberg

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	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	M	S	S	L	S	R	E	L	V	F	L	I	L	Q	F	L	D	E	E	K	F	K	E	T	V	H	K	L	E	Q	E	S	G	F	F	F	N	M	K	Y	F	E	E	K	V	H	A	G	E	W	D	E	V	E	K	Y	L	S	G	F	T	K	V	D	D	N	R	Y	S	M
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)																			T	T														S													T	T										T	T	T			T	T	S
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	K	I	F	F	E	I	R	K	Q	K	Y	L	E	A	L	D	R	H	D	R	A	K	A	V	D	I	L	V	K	D	L	K	V	F	S	T	F	N	E	E	L	Y	K	E	I	T	Q	L	L	T	L	E	N	F	R	E	N	E	Q	L	S	K	Y	G	D	T	K	S	A	R
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)																	T	T												T	S	G	G	G	T	T	T										G	G	G	G	S	S		G	G	G	S	T	T	S	T	T
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.
Sequence	S	I	M	L	I	E	L	K	K	L	I	E	A	N	P	L	F	R	E	K	L	V	F	P	T	L	K	A	S	R	L	R	T	L	I	N	Q	S	L	N	W	Q	H	Q	L	C	K	N	P	R	P	N	P	D	I	K	T	L	F	T	D	H	T	C	T
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)															T	T	T	T	T	S	S	S						T	T																T		S	S			S	S						S	S	S