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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c5c6tA_

Fold library idPDB HeaderMoleculeTitle
c5c6tA_PDB header: viral protein/immue systemChain: A: PDB Molecule: envelope glycoprotein b;PDBTitle: crystal structure of hcmv glycoprotein b in complex with 1g2 fab


Added to library: Sat Sep 26 08:34:52 2015
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence KYPYRVCSMAQGTDLIRFERNIVCTSMLDEGIMVVYKRNIVAHTFKVRVYQKVLTFRRSYAYHRTTYLLG
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Known secondary structure (DSSP)


S

SS

B

















TT
 .........80.........90.........100.........110.........120.........130.........140
Sequence SNTEYVAPPMWEIHHINSHSQCYSSYSRVIAGTVFVAYHRDSYENKTMQLMPDDYTHSTRYVTVKDQWHS
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Known secondary structure (DSSP)


SS
SSSSSTT










S

S



 .........150.........160.........170.........180.........190.........200.........210
Sequence RNLTRETSNLNCMVTITTARSKYPYHFFATSTGDVVDISPFYNGTNRNASYFGENADKFFIFPNYTIVSD
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Known secondary structure (DSSP)




TT
S
TTS

B
TT

TT
GGGS
B
S
TTT

S
 .........220.........230.........240.........250.........260.........270.........280
Sequence FGRPNSALETHRLVAFLERADSVISWDIQDEKNVTCQLTFWEASERTIRSEAEDSYHFSSAKMTATFLSK
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Known secondary structure (DSSP) SSSSS





SS



TTTS

S

SSTTTT
 .........290.........300.........310.........320.........330.........340.........350
Sequence KQEVNMSDSALDCVRDEAINKLQQIFNTSYNQTYEKYGNVSVFETTGGLVVFWQGIKQHLSNMESVHNLV
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Known secondary structure (DSSP) SS
B
TT
GGGTTTSS
SSS

BTTS










S
T
 .........360.........370.........380.........390.........400.........410.........420
Sequence YAQLQFTYDTLRGYINRALAQIAEAWCVDQRRTLEVFKELSKINPSAILSAIYNKPIAARFMGDVLGLAS
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Known secondary structure (DSSP) TT

S



B

TTS
B

 .........430.........440.........450.........460.........470.........480.........490
Sequence CVTINQTSVKVLRDMNVKESPGRCYSRPVVIFNFANSSYVQYGQLGEDNEILLGNHRTEECQLPSLKIFI
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Known secondary structure (DSSP)


S

SB
B
SS
TTBB
SS



SS






GGG
SS




B

SS

 .........500.........510.........520.........530.........540.........550.........560
Sequence AGNSAYEYVDYLFKRMIDLSSISTVDSMIALDIDPLENTDFRVLELYSQKELRSSNVFDLEEIMREFNSY
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Known secondary structure (DSSP) TTSSSB
TTTS






















SS
GGG
SS
 ......
Sequence KQRVKY
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Known secondary structure (DSSP) TT




Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Michael Sternberg 
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