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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c5c2gD_

Fold library idPDB HeaderMoleculeTitle
c5c2gD_PDB header: lyaseChain: D: PDB Molecule: form ii rubisco;PDBTitle: gws1b rubisco: form ii rubisco derived from uncultivated2 gallionellacea species (cabp-bound).


Added to library: Sat Dec 19 08:35:27 2015
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence GSHMDQSNRYADLSLKEEDLIKGGNHILVAYTMEPAAGVGYLEAAAHIAAESSTGTNVEVSTTDEFTKGV
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Known secondary structure (DSSP)

SS

B
TT

T

TT

TTT

SS

TT

TT
 .........80.........90.........100.........110.........120.........130.........140
Sequence DALVYFIDEAKGIMKVAYPNDLFDRNVTDGRVMIVSFLTLCIGNNQGMGDIANLQMQDFYVPPRMLQLFD
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Known secondary structure (DSSP)

TTTTGGGS
B
TTT

B
TGGGS
TT

TS
 .........150.........160.........170.........180.........190.........200.........210
Sequence GPAKDISDLWRILGRPVKDGGYISGTIIKPKLGLRPEPFAKAAYQFWLGGDFINDEPQGNQVFCPIKKVL
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Known secondary structure (DSSP)

S

TTS
SSS





SSSS


TT
SB


TT
S

TTS
 .........220.........230.........240.........250.........260.........270.........280
Sequence PLVYDSLKRAQDETGQAKLFSMNITADDHYEMCARADFALETFGPDADKVAFLVDGFVGGPGMVTTARRQ
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Known secondary structure (DSSP)
S

B


SSGGGGGG
 .........290.........300.........310.........320.........330.........340.........350
Sequence YPSQYLHYHRAGHGMVTSPSSKRGYTAFVLAKMSRLQGASGIHVGTMGYGKMEGGKDDRIIAYMIERDSC
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Known secondary structure (DSSP)
TTS

TTTSTT

S
T
S


TTSSSSS

GGG
S
 .........360.........370.........380.........390.........400.........410.........420
Sequence TGPFYHQEWYGMKPTTPIISGGMNALRLPGFFENLGHGNVINTAGGGSYGHIDSPAAGAVSLRQAYECWK
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Known secondary structure (DSSP)
SS

TT



SS

TTTS


S
T
SS
 .........430.........440.........450.........460
Sequence AGADPIEWAKEHKEFARAFESFPKDADKLFPGWREKLGVH
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Known secondary structure (DSSP) TT

TT
SSTTT


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Michael Sternberg 
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