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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c5c22A_

Fold library idPDB HeaderMoleculeTitle
c5c22A_2.30PDB header: protein transportChain: A: PDB Molecule: chromosomal hemolysin d;


Added to library: Sat Feb 20 08:26:40 2016
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence SKEIKPIENSIVKEIIVKEGESVRKGDVLLKLTALGAEADTLKTQSSLLQTRLEQTRYQILSRSIELNKL
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Known secondary structure (DSSP)


SSS


TT

TT
TTTS
 .........80.........90.........100.........110.........120.........130.........140
Sequence PELKLPDEPYFQNVSEEEVLRLTSLIKEQFSTWQNQKYQKELNLDKKRAERLTILARINRYENLSRVEKS
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Known secondary structure (DSSP)







GGGSS

 .........150.........160.........170.........180.........190.........200.........210
Sequence RLDDFRSLLHKQAIAKHAVLEQENKYVEAANELRVYKSQLEQIESEILSAKEEYQLVTRLFKNEILDKLR
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Known secondary structure (DSSP) TSTTTT
S
 .........220.........230.........240.........250.........260......
Sequence QTTDNIELLTLELEKNEERQQASVIRAPVSGKVQQLKVHTEGGVVTTAETLMVIVP
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Known secondary structure (DSSP) S

SS
S




TT

TT




Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Michael Sternberg 
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