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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c5c1cA_

Fold library idPDB HeaderMoleculeTitle
c5c1cA_PDB header: hydrolaseChain: A: PDB Molecule: pectinesterase;PDBTitle: crystal structure of the pectin methylesterase from aspergillus niger2 in deglycosylated form


Added to library: Sat Jul 4 08:22:29 2015
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence ESRTSAPSGCLTVGSDGTYSTIGDALDALGSSTSSACIYVASGTYEEQLTIDYAGDLTLYGETTDTSTYK
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Known secondary structure (DSSP)

B
S

TT
STTSSBSSTT

S

S



SS

BS
TT
ST
 .........80.........90.........100.........110.........120.........130.........140
Sequence DNVVTITHTISSPDAGSLDKSATVNVVSDGFSMYNINVENGYGEGAQAVALVGNADQLGFYGCQFSGYQD
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Known secondary structure (DSSP) T




SSTGGG
S
STT
S



TTS


SSSSS

SBS
 .........150.........160.........170.........180.........190.........200.........210
Sequence TLYVKAGTQYYSNCMIEGAVDYIFGDASVWFGECDIVSNGAGAITASSRETSSDSGWYAIDNCNIKAASG
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Known secondary structure (DSSP)
SS
SBS
S
S
SSS


STT



S

TT
 .........220.........230.........240.........250.........260.........270.........280
Sequence VSLTEEVYLGRPWRVLARVIYQNSVLSDIINPKGWTTMADGATPLYYEYNNSGAGSDTSDREYETSISAA
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Known secondary structure (DSSP)


TT


SSTT
S

TTB
TT
B


STT


S
BSTT


TT

S



SS
 .........290.........
Sequence VDKTTVLGETWGDWIDRSY
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Known secondary structure (DSSP)


TTS
S


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Michael Sternberg 
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