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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c5c0xK_

Fold library idPDB HeaderMoleculeTitle
c5c0xK_PDB header: hydrolase/rnaChain: K: PDB Molecule: exosome complex exonuclease rrp6;PDBTitle: structure of a 12-subunit nuclear exosome complex bound to structured2 rna


Added to library: Sat Aug 8 08:25:21 2015
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence FIPLLKEKPNALKPLSESLRLVDDDENNPSHYPHPYEYEIDHQEYSPEILQIREEIPSKSWDDSVPIWVD
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Known secondary structure (DSSP)




S

TT
SS
S





SS






TTS


TTTTS








GGG



 .........80.........90.........100.........110.........120.........130.........140
Sequence TSTELESMLEDLKNTKEIAVDLEHHDYRSYYGIVCLMQISTRERDYLVDTLKLRENLHILNEVFTNPSIV
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Known secondary structure (DSSP) STT
S
SSSSS

SS
TTTTTTTGGGGT
TTS
 .........150.........160.........170.........180.........190.........200.........210
Sequence KVFHGAFMNIIWLQRDLGLYVVGLFDTYHASKAIGLPRHSLAYLLENFANFKTSKKYQLADWRIRPLSKP
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Known secondary structure (DSSP) SS




SST
S


S





S
S

SS

 .........220.........230.........240.........250.........260.........270.........280
Sequence MTAYARADTHFLLNIYDQLRNKLIESNKLAGVLYESRNVAKRRFEYSKYRPLTPSSEVYSLLETISVPQI
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Known secondary structure (DSSP) TT





GGG

SS

SS



GGGS
 .........290.........300.........310.........320.........330.........340.........350
Sequence RDVMERFSVLCNSNITNSSILLGKILPREEHDIAYSKDGLPNKVKTEDIRIRAQNFKSALANLEDIIFEI
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Known secondary structure (DSSP)




SSSTTTTT




B


SS



B

T





Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Michael Sternberg 
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