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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c5c0wK_

Fold library idPDB HeaderMoleculeTitle
c5c0wK_PDB header: hydrolase/rnaChain: K: PDB Molecule: exosome complex exonuclease rrp6;PDBTitle: structure of a 12-subunit nuclear exosome complex bound to single-2 stranded rna substrates


Added to library: Sat Aug 1 08:23:22 2015
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence NPDVLLSRVINVVRAASSLASQDVDFYKNLDRGFSKDLKSKADKLADMANEIILSIDWNNFGNIMDNLLE
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Known secondary structure (DSSP)
S


S

 .........80.........90.........100.........110.........120.........130.........140
Sequence MSDHSLDKLNCAINSKTKRVEKPQLKFKSPIDNSESHPFIPLLKEKPNALKPLSESLRLVDDDENNPSHY
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Known secondary structure (DSSP)






SGGGSSS






SS







SS
SS
S





SSS



 .........150.........160.........170.........180.........190.........200.........210
Sequence PHPYEYEIDHQEYSPEILQIREEIPSKSWDDSVPIWVDTSTELESMLEDLKNTKEIAVDLEHHDYRSYYG
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Known secondary structure (DSSP)

TTS


GGGGS








TTSS


STT
S
SSSSS
 .........220.........230.........240.........250.........260.........270.........280
Sequence IVCLMQISTRERDYLVDTLKLRENLHILNEVFTNPSIVKVFHGAFMNIIWLQRDLGLYVVGLFDTYHASK
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Known secondary structure (DSSP)
SS
TTTTTTTGGGGT
TTSSS




SS
 .........290.........300.........310.........320.........330.........340.........350
Sequence AIGLPRHSLAYLLENFANFKTSKKYQLADWRIRPLSKPMTAYARADTHFLLNIYDQLRNKLIESNKLAGV
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Known secondary structure (DSSP) T
S


S





GGGGS
TT
SS

TTT
 .........360.........370.........380.........390.........400.........410.........420
Sequence LYESRNVAKRRFEYSKYRPLTPSSEVYSPIEKESPWKILMYQYNIPPEREVLVRELYQWRDLIARRDDES
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Known secondary structure (DSSP)


TTTS


SSSS
SS

SSTT

TTSTTTT

 .........430.........440.........450.........460.........470.........480.........490
Sequence PRFVMPNQLLAALVAYTPTDVIGVVSLTNGVTEHVRQNAKLLANLIRDALRNIKNTNEEATPIPSSETKA
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Known secondary structure (DSSP)

T


SSS
SS


STTTTTTT
 .........500.........510.........520.........530.........540.........550.........560
Sequence DGILLETISVPQIRDVMERFSVLCNSNISKSRAKPVTNSSILLGKILPREEHDIAYSKDGLPNKVKTEDI
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Known secondary structure (DSSP) S
TTT






SSTT





TTS


 .........570......
Sequence RIRAQNFKSALANLED
Predicted secondary structure

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Known secondary structure (DSSP) T



Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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