Fold library entry viewer: c5c0wJ_

Added to library: Sat Aug 1 08:32:26 2015
Links to external resources

	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	R	R	K	R	L	A	D	G	L	S	V	T	Q	K	V	F	V	R	S	R	N	G	G	A	T	K	I	V	R	E	H	Y	L	R	S	D	I	P	C	L	S	R	S	C	T	K	C	P	Q	I	V	V	P	D	A	Q	N	E	L	P	K	F	I	L	S	D	S	P	L	E
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)						T	T	S													T	T												B	S						B	S	S		S										S	S								B		S	S
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	L	S	A	P	I	G	K	H	Y	V	V	L	D	T	N	V	V	L	Q	A	I	D	L	L	E	N	P	N	C	F	F	D	V	I	V	P	Q	I	V	L	D	E	V	R	N	K	S	Y	P	V	Y	T	R	L	R	T	L	C	R	D	S	D	D	H	K	R	F	I	V	F
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)		T	T	T	T																T	T	T	T	S		T	T	S																															S			S	S
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	H	N	E	F	S	E	H	T	F	V	E	R	L	P	N	E	T	I	N	D	R	N	N	R	A	I	R	K	T	C	Q	W	Y	S	E	H	L	K	P	Y	D	I	N	V	V	L	V	T	N	D	R	L	N	R	E	A	A	T	K	E	V	E	S	N	I	I	T	K	S	L
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)			T	T	B	S	S	S						T	T																						T	G	G	G	T																		T	T		S	S
	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280
Sequence	V	Q	Y	I	E	L	L	P	N	A	D	D	I	R	D	S	I	P	Q	M	T	F	S	D	F	T	F	P	E	Y	Y	S	T	A	R	V	M	G	G	L	K	N	G	V	L	Y	Q	G	N	I	Q	I	S	E	Y	N	F	L	E	G	S	V	S	L	P	R	F	S	K	P
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)					T	T	S	S							T	T	S																										T											S	S	B	T	T							T	T		S	S
	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350
Sequence	V	L	I	V	G	Q	K	N	L	N	R	A	F	N	G	D	Q	V	I	V	E	L	L	P	Q	S	E	W	K	A	P	S	S	I	V	L	D	S	E	H	F	D	V	N	D	N	P	D	I	N	T	T	V	I	S	D	K	Q	R	R	L	L	A	K	D	A	M	I	A	Q
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)					S					T	T			T	T										G	G	G		B				S			B		G	G	G	S	S	T	T
	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420
Sequence	R	S	K	K	I	Q	P	T	A	K	V	V	Y	I	Q	R	R	S	W	R	Q	Y	V	G	Q	L	A	P	S	S	V	D	P	Q	S	S	S	T	Q	N	V	F	V	I	L	M	D	K	C	L	P	K	V	R	I	R	T	R	R	A	A	E	L	L	D	K	R	I	V	I
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)			S			B		B																				G	G	G			T	T			S									S	S	S	S	S								T	T	T	T	G	G	G	G
	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490
Sequence	S	I	D	S	W	P	T	T	H	K	Y	P	L	G	H	F	V	R	D	L	G	T	I	E	S	A	Q	A	E	T	E	A	L	L	L	E	H	D	V	E	Y	R	P	F	S	K	K	V	L	E	C	L	P	A	E	G	H	D	W	K	A	P	T	K	L	D	D	P	E	A
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)							T	T		S	S												S	S													T	T				S										S		T	T	G	G	G					S	S	T	T
	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560
Sequence	V	S	K	D	P	L	L	T	K	R	K	D	L	R	D	K	L	I	C	S	I	D	P	P	G	C	V	D	I	N	D	A	L	H	A	K	K	L	P	N	G	N	W	E	V	G	V	H	I	A	D	V	T	H	F	V	K	P	G	T	A	L	D	A	E	G	A	A	R	G
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)					G	G	G	G	G					T	T	S								T	T			S											T	T	S															S		T	T	S
	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630
Sequence	T	S	V	Y	L	V	D	K	R	I	D	M	L	P	M	L	L	G	T	D	L	C	S	L	K	P	Y	V	D	R	F	A	F	S	V	I	W	E	L	D	D	S	A	N	I	V	N	V	N	F	M	K	S	V	I	R	S	R	E	A	F	S	Y	E	Q	A	Q	L	R	I
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	B					S	S					S	S						T	T	T	S	S			B	T	S													T	T
	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.	.	.	.	690	.	.	.	.	.	.	.	.	.	700
Sequence	D	D	K	T	Q	N	D	E	L	T	M	G	M	R	A	L	L	K	L	S	V	K	L	K	Q	K	R	L	E	A	G	A	L	N	L	A	S	P	E	V	K	V	H	M	D	S	E	T	S	D	P	N	E	V	E	I	K	K	L	L	A	T	N	S	L	V	E	E	F	M
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)		S	S	S																											T															S	S	S	S
	.	.	.	.	.	.	.	.	.	710	.	.	.	.	.	.	.	.	.	720	.	.	.	.	.	.	.	.	.	730	.	.	.	.	.	.	.	.	.	740	.	.	.	.	.	.	.	.	.	750	.	.	.	.	.	.	.	.	.	760	.	.	.	.	.	.	.	.	.	770
Sequence	L	L	A	N	I	S	V	A	R	K	I	Y	D	A	F	P	Q	T	A	M	L	R	R	H	A	A	P	P	S	T	N	F	E	I	L	N	E	M	L	N	T	R	K	N	M	S	I	S	L	E	S	S	K	A	L	A	D	S	L	D	R	C	V	D	P	E	D	P	Y	F
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)																T	T	T						B					G	G	G	G												S						S	S										T				S	S		S	T
	.	.	.	.	.	.	.	.	.	780	.	.	.	.	.	.	.	.	.	790	.	.	.	.	.	.	.	.	.	800	.	.	.	.	.	.	.	.	.	810	.	.	.	.	.	.	.	.	.	820	.	.	.	.	.	.	.	.	.	830	.	.	.	.	.	.	.	.	.	840
Sequence	N	T	L	V	R	I	M	S	T	R	C	M	M	A	A	Q	Y	F	Y	S	G	A	Y	S	Y	P	D	F	R	H	Y	G	L	A	V	D	I	Y	T	H	F	T	S	P	I	R	R	Y	C	D	V	V	A	H	R	Q	L	A	G	A	I	G	Y	E	P	L	S	L	T	H
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)												S								G	G	G	S		G	G	G	G		B	T	T	T	T	B	S						S		T	T	T	B														T	T	S	S				G	G	G
	.	.	.	.	.	.	.	.	.	850	.	.	.	.	.	.	.	.	.	860	.	.	.	.	.	.	.	.	.	870	.	.	.	.	.	.	.	.	.	880	.	.	.	.	.	.	.	.	.	890	.	.	.	.	.	.	.	.	.	900	.	.	.	.	.	.	.	.	.	910
Sequence	R	D	K	N	K	M	D	M	I	C	R	N	I	N	R	K	H	R	N	A	Q	F	A	G	R	A	S	I	E	Y	Y	V	G	Q	V	M	R	N	N	E	S	T	E	T	G	Y	V	I	K	V	F	N	N	G	I	V	V	L	V	P	K	F	G	V	E	G	L	I	R	L
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	G																																							T												S	S							T	T	T								G
	.	.	.	.	.	.	.	.	.	920	.	.	.	.	.	.	.	.	.	930	.	.	.	.	.	.	.	.	.	940	.	.	.	.	.	.	.	.	.	950	.	.	.	.	.	.	.	.	.	960	.	.	.	.	.	.	.	.	.	970
Sequence	D	N	L	T	E	D	P	N	S	A	A	F	D	E	V	E	Y	K	L	T	F	V	P	T	N	S	D	K	P	R	D	V	Y	V	F	D	K	V	E	V	Q	V	R	S	V	M	D	P	I	T	S	K	R	K	A	E	L	L	L	K
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	G	G	T		S		G	G	G					T	T	T	T							T	T			S						T	T													S	S	S

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PDB structure

FASTA sequence

Hidden Markov model

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