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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c5c0pA_

Fold library idPDB HeaderMoleculeTitle
c5c0pA_PDB header: hydrolaseChain: A: PDB Molecule: endo-arabinase;PDBTitle: the crystal structure of endo-arabinase from bacteroides2 thetaiotaomicron vpi-5482


Added to library: Sat Jul 4 08:23:19 2015
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence ESFTIPVSSLRLRDPFILVDKKTSXYYLHFNNNLKIRVYKSKDLSTWKDEGYSFIAKSDFWGQQDFWAPD
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Known secondary structure (DSSP)



GGG


SS
TTTT
SSSSSSS


TT
S

 .........80.........90.........100.........110.........120.........130.........140
Sequence VYEYEGRYYLFTTFSNAGVKRGTSILVSDSPKGPFTPLVNKAITPSGWXCLDGSLYIDKEGNPWLLFCRE
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Known secondary structure (DSSP) TTTTSSTT


SSSS
SS
TTS

TTS

 .........150.........160.........170.........180.........190.........200.........210
Sequence WLETIDGEIYAQRLAKDLKTTEGDPYLLFKASEAPWVGSITSSGVTGNVTDAPFIYRLDDGKLIXLWSSF
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Known secondary structure (DSSP) SB

TTSSSGGGSTTB

TTB


TTS
 .........220.........230.........240.........250.........260.........270.........280
Sequence RKTDGKYAIGQAVSASGNVLGPWVQEPETLNSDDGGHAXVFKDLKGRLXISYHAPNSQTEHPVITPIYIK
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Known secondary structure (DSSP) BTTT

TT

TT



SS
S
SSS

TTS
SSSSS



B
 ....
Sequence DGKF
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Known secondary structure (DSSP) TTB


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
© Structural Bioinformatics Group, Imperial College, London
Michael Sternberg 
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