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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c5by3A_

Fold library idPDB HeaderMoleculeTitle
c5by3A_PDB header: sugar binding proteinChain: A: PDB Molecule: btgh115a;PDBTitle: a novel family gh115 4-o-methyl-alpha-glucuronidase, btgh115a, with2 specificity for decorated arabinogalactans


Added to library: Sat Jul 25 08:29:22 2015
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence DFVLQSGQPVAIACSGSEAPVVRTSLDLLSRDLQTVLSATAHIDTNTGNIIVGTIGQSKLIEQAGIDISA
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Known secondary structure (DSSP)
TTS


TTS



SS

STTT
TT



T
 .........80.........90.........100.........110.........120.........130.........140
Sequence LKNKKQAFXLAVSEDGKLVVAGSDSHGTAYGILEISRLLGVSPWEWWADVTPEKKETFRLSGKFRELQSP
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Known secondary structure (DSSP) TSS
SS

TTS
SSTT

TTTTTS






S
TT




 .........150.........160.........170.........180.........190.........200.........210
Sequence SVEYRGIFINDEDWGLXPWSNKTYEPSDVKGEIGPRTNERIFELLLRLRANTYWPAXHECTLPFFLTKGN
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Known secondary structure (DSSP) SSS

SGGGTTTS

SSTT


TT





TTS

GGGSTT
 .........220.........230.........240.........250.........260.........270.........280
Sequence REAAKKYGIFXGASHCEPXACNAAGEWKIRGKGAYDYVNNSPAVYQFWEDRVKEVAGQEILYTLGXRGVH
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Known secondary structure (DSSP) T



TT
TTS



S
S
SSS
B

S


SS
 .........290.........300.........310.........320.........330.........340.........350
Sequence DGKXQGAKTVEEQKAVLDRVFVDQRGLLEKYVNKDVTQVPQVFIPYKEVLDIYHAGLQVPEDVTLXWCDD
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Known secondary structure (DSSP) SS

SS

ST
SSGGGS



TTTT



TTSB
 .........360.........370.........380.........390.........400.........410.........420
Sequence NYGYIRHFPTAEERARKGGNGVYYHVSYWGRPHDHLWLSTXSPSLIYQQXKQAYDQGIQKXWILNVGDIK
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Known secondary structure (DSSP) SSS
BS



STT
SSB

SS

B
SS



TT

S
TTST
 .........430.........440.........450.........460.........470.........480.........490
Sequence PAEYQIELFXDXAWNLDKVSSEGVTAHLKHWLERELGTSCAKTILSVXQEHYRLAHIRKPEFXGNTREEE
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Known secondary structure (DSSP) T

S
S
S
GGGTT


SS
 .........500.........510.........520.........530.........540.........550.........560
Sequence KNPVYRVVKDLPWSEREINERLNAYSELSETVEKAASKVPAGRQSAYFELVKYPVQAATQXNRKLLYAQL
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Known secondary structure (DSSP) SSGGGGS



S
BGGGS
GGGT
 .........570.........580.........590.........600.........610.........620.........630
Sequence ARHDKEDWEKSDAAYDSIAALTQHYNSLENGKWNRXXDFKPRKLPVFNRVERKAATAPXTADRKAVCQWN
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Known secondary structure (DSSP) TTSS
TTTSTTTTTTTS

SSGGG
GGGS






SS

B




S

 .........640.........650.........660.........670.........680.........690.........700
Sequence AAEAKKGNAIVCEGLGYESKAAEIKKGDALTFSFGNLKTDSVEVDIRLLPNHPVHGDKLRFTVSLDGAEP
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Known secondary structure (DSSP) TTS
SS



TT
STTS


TT




SS




SSSS

TT


 .........710.........720.........730.........740.........750.........
Sequence EVIAYETKGRSEEWKENVLRNQAIRKIVLPVTGKKSHQLVIKALDEGVILDQVXLYEVN
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Known secondary structure (DSSP)



TT
T




SS
SSS





Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Michael Sternberg 
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