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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c5bv9A_

Fold library idPDB HeaderMoleculeTitle
c5bv9A_PDB header: hydrolaseChain: A: PDB Molecule: cellulose 1,4-beta-cellobiosidase;PDBTitle: the structure of bacillus pumilus gh48 in complex with cellobiose


Added to library: Sat Oct 3 08:19:58 2015
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence SNKERFLTLYHQIKSDANGYFSPEGIPYHSIETLICEAPDYGHMTTSEAYSYWLWLEVLYGHYTRDWSKL
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Known secondary structure (DSSP)

TTT
SB
TTS
B
SBS
SS

SSSSSTTS

 .........80.........90.........100.........110.........120.........130.........140
Sequence EAAWDNMEKYIIPVNEDGNDEQPHMSAYNPSSPATYASEKPYPDQYPSQLSGARPAGQDPIDGELKSTYG
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Known secondary structure (DSSP) TS


SSSS
SSTTGGG

TTS







SSGGG
S



S




SSS
 .........150.........160.........170.........180.........190.........200.........210
Sequence TNETYLMHWLLDVDNWYKYGNLLNPSHKAAYVNTFQRGQQESVWEAIPHPSQDDKSFGKPNEGFMSLFTK
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Known secondary structure (DSSP)




S

STT
TT



SSSTT
SS


S
TT

GGG


S
SSSBBTTTBTGGGT
 .........220.........230.........240.........250.........260.........270.........280
Sequence ENQVPAAQWRYTNATDADARAIQAIYWAKELGYNNSTYLDKAKKMGDFLRYGMYDKYFQTIGSGKQGNPY
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Known secondary structure (DSSP)
SS





TT


GGGGB
TT
B
TTTTTTT


 .........290.........300.........310.........320.........330.........340.........350
Sequence PGNGKGACHYLMAWYTSWGGGLGDYANWSWRIGASHCHQGYQNPVAAYALSSDKGGLKPSSATGASDWEK
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Known secondary structure (DSSP) B

TTTTB
SS
BS


STT




SGGG

STTT



SSSS
 .........360.........370.........380.........390.........400.........410.........420
Sequence TLKRQLEFYVWLQSKEGAIAGGATNSWNGDYSAYPAGRSTFYDMAYEDAPVYHDPPSNNWFGMQAWPMER
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Known secondary structure (DSSP) TB
TTS
B

SSBTTTTB


TT

TTSS
S
BTTBTTTBT
 .........430.........440.........450.........460.........470.........480.........490
Sequence VAELYYIFVKDGDKTSENVQMAKSCITKWVNYALDYIFIGSRPVSDEEGYFLDDQGRRILGGTNATVATT
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Known secondary structure (DSSP) TT
SSSTT

B
TTSBBB
TTS
B

S
SS



 .........500.........510.........520.........530.........540.........550.........560
Sequence SAPGEFWLPGNIAWSGQPDTWNGFQSATGNPNLTAVTKDPTQDTGVLGSLVKAFTFFAAATKLETGNYTA
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Known secondary structure (DSSP) B








GGG



TT

B

SS

 .........570.........580.........590.........600.........610.........620.........630
Sequence LGVRAKDAAAQLLEVAWNYNDGVGIVTEEEREDYDRFFKKEVYFPNGWNGTFGQGNQIPGSSTIPSDPQR
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Known secondary structure (DSSP) TTB
SS
B


GGGGGGTSTT


TTS
S
SS


GGG
 .........640.........650.........660.........670.........680.........690.........700
Sequence GGNGVYTSFADLRPNIKQDPAWSSLESKYQSSFNEATGKWENGAPVFTYHRFWSQVDMATAYAEYHRLIN
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Known secondary structure (DSSP) T


GGGGGSTTTTTTSS




BTT
 .
Sequence L
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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