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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c5bv3C_

Fold library idPDB HeaderMoleculeTitle
c5bv3C_PDB header: hydrolaseChain: C: PDB Molecule: m7gpppx diphosphatase;PDBTitle: yeast scavenger decapping enzyme in complex with m7gdp


Added to library: Sat Aug 15 08:28:35 2015
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence GMFASLIKRFQFVSVLDSNPQTKVMSLLGTIDNKDAIITAEKTHFLFDETVRDGRSTPVLYNCENEYSCI
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Known secondary structure (DSSP)

TTTTTT













S


STTSTT
 .........80.........90.........100.........110.........120.........130.........140
Sequence NGIQELKEITSNDIYYWGLSVIKQDMESNPTAKLNLIWPATPIHIKKYEQQNFHLVRETPEMYKRIVQPY
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Known secondary structure (DSSP) TTTT

BTTTB
SSS

S



 .........150.........160.........170.........180.........190.........200.........210
Sequence IEEGRLKWVNNILYEGAESERVVYKDFSEENKDDGFLILPDMKWDGMNLDSLYLVAIVYRTDIKTIRDLR
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Known secondary structure (DSSP)

TTS
TTGGG



GGGGGG

TT

SS
GGG
S
SS
SSGGG

 .........220.........230.........240.........250.........260.........270.........280
Sequence YSDRQWLINLNNKIRSIVPGCYNYAVHPDELRILVHYQPSYYHFNIHIVNIKHPGLGNSIAAGKAILLED
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Known secondary structure (DSSP) GGGTTTSS
GGGSS
SSSS
TT


STTTT
TTT
 .........290.........300.........310.........320.........330...
Sequence IIEMLNYLGPEGYMNKTITYAIGENHDLWKRGLEEELTKQLERDGIPKIPKIV
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Known secondary structure (DSSP) TTSBTTBGGG

TTSTTTT




TT


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Michael Sternberg 
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