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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c5btrB_

Fold library idPDB HeaderMoleculeTitle
c5btrB_PDB header: hydrolase/substrateChain: B: PDB Molecule: nad-dependent protein deacetylase sirtuin-1,nad-dependentPDBTitle: crystal structure of sirt1 in complex with resveratrol and an amc-2 containing peptide


Added to library: Sat Jul 11 08:22:36 2015
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence SRDNLLFGDEIITNGSDWTPRPRIGPYTFVQQHLMIGTDPRTILKDLLPETIPPPELDDMTLWQIVINIL
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Known secondary structure (DSSP)

SSS

S






SS



T

STT



TT

 .........80.........90.........100.........110.........120.........130.........140
Sequence SEPPKRKKRKDINTIEDAVKLLQESKKIIVLTGAGVSVSSGIPDFRSRDGIYARLAVDFPDLPDPQAMFD
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Known secondary structure (DSSP) S






TT

S
SS
GGGSTTTT


SSSSSS
TT

SGGGGGB
 .........150.........160.........170.........180.........190.........200.........210
Sequence IEYFRKDPRPFFKFAKEIYPGQFQPSLCHKFIALSDKEGKLLRNYTQNIDTLEQVAGIQRIIQCHGSFAT
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Known secondary structure (DSSP)


TTS



TT



S
TT
SSTT
 .........220.........230.........240.........250.........260.........270.........280
Sequence ASCLICKYKVDCEAVRGDIFNQVVPRCPRCPADEPLAIMKPEIVFFGENLPEQFHRAMKYDKDEVDLLIV
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Known secondary structure (DSSP) SSS

TT


B
SSS
TT
TT
B

BTS


TTT
S
 .........290.........300.........310.........320.........330.........340.........350
Sequence IGSSLKVRPVALIPSSIPHEVPQILINREPLPHLHFDVELLGDCDVIINELCHRLGGEYAKLSSNITEQY
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Known secondary structure (DSSP) S



STTGGGS
TTS
SS

TT


SS

TT





SS
 .........360......
Sequence LFLPPNRYIFHGAEVY
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Known secondary structure (DSSP) TTT
TT




Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Michael Sternberg 
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