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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c5bthA_

Fold library idPDB HeaderMoleculeTitle
c5bthA_PDB header: hydrolaseChain: A: PDB Molecule: decapping nuclease rai1;PDBTitle: crystal structure of candida albicans rai1


Added to library: Sat Jul 11 08:18:22 2015
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence MAKSLPLNSRSKTTALKQPRELFSYARDIDGKYVYDDPENSLSYYYLPDSTIDTGIDLQGGYSKFKKIPD
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Known secondary structure (DSSP)


TT


S



TTS

S
GGGG




TT

BTTTTGGG
B


G
 .........80.........90.........100.........110.........120.........130.........140
Sequence EQNLADFNSLLKAIIKYETSEGKKISSDIITFREIMTKILSLPYNLTDPIDLYVVPFDGQLFIKSDDELD
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Known secondary structure (DSSP) GGGS

TS



SGGG
TT

TT
 .........150.........160.........170.........180.........190.........200.........210
Sequence MKRRKEQEVRMKQTNTVERYDYMKRCEYVGYKFETIATIPKPWSQVSRSQIENRNKKVVNNYEQYLSVIR
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Known secondary structure (DSSP) SS
SS
GGGS
TTTTS

BS

 .........220.........230.........240.........250.........260.........270.........280
Sequence TGIGNVKLVLAGEIDCCWDYLPDEQNKKLNHYVELKTSRIIENNSQVVSFEQKLFKAWCQCFLMGVTKII
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Known secondary structure (DSSP) TT
SS


SSGGGSGGG


ST

 .........290.........300.........310.........320.........330.........340.........350
Sequence YGFRDNNLILKNVELFNTEEIPILIKNNPLTNAATEKKINCTNALKWYGAVVDWLNTTVDKKDEIKSYRL
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Known secondary structure (DSSP)
TT
BGGGT
GGG


TTTS

S
SS

S

 .........360.........370.........380.........390.
Sequence KYDPVRKSFTLSETDSETNEKLRNGQLLTPEFTEWRQSLKK
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Known secondary structure (DSSP) TTTT

TTTSS
TTT


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Michael Sternberg 
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