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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c5bq3A_

Fold library idPDB HeaderMoleculeTitle
c5bq3A_PDB header: transport proteinChain: A: PDB Molecule: rhamnose abc transporter, rhamnose-binding protein;PDBTitle: crystal structure of a sugar abc transporter (actodo_00688) from2 actinomyces odontolyticus atcc 17982 at 2.60 a resolution


Added to library: Sat Aug 8 08:52:46 2015
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence SGSYDVSSQSITFIPKQLNNPFSDVXLGGGKNAAGEIGFAEVNVVGPLEASSSSQVSFINSEVQAGTNVL
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Known secondary structure (DSSP)





SS

SSSS
T
S


SS

TTTTTT
S
 .........80.........90.........100.........110.........120.........130.........140
Sequence VIAANDPDAVCPALQDARKAGTKVVTFDSDSAADCRDLFINQVESKQVAITXLDXVSDQIGGSGKVAILS
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Known secondary structure (DSSP)

SSTTTST
SS


TTS
SSS
TS
 .........150.........160.........170.........180.........190.........200.........210
Sequence ATANAANQNAWIKFXEDEIASNDKYKGIEIVAKVYGDDDDTKSFQEAQGLLQAHPDLNAIVSPTTVGIAA
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Known secondary structure (DSSP) S
TT

TTSTT
TT

TT


S
 .........220.........230.........240.........250.........260.........270.........280
Sequence TARYLSTSDYKGKVFLTGLGLPNEXRSFVKDGTVKEFALWDPAQLGYVAAYAGAALDSGAIKGEVGEKFT
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Known secondary structure (DSSP) STTTTTSB

TS
S


TS

S
TT
 .........290.........300.........310...
Sequence AGNLGERTIGENKTVVVGDPVRFNADNIDKYDF
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Known secondary structure (DSSP)
GGG


GGG

S

TTTGGG



Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Michael Sternberg 
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