PHYRE Protein Fold Recognition Server

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Protein Homology/analogY Recognition Engine V 2.2

Fold library entry viewer: c5bp9A_

Fold library id	PDB Header	Molecule	Title
c5bp9A_	PDB header: transferase	Chain: A: PDB Molecule: putative methyltransferase protein;	PDBTitle: crystal structure of sam-dependent methyltransferase from bacteroides2 fragilis in complex with s-adenosyl-l-homocysteine

Links to external resources
Added to library: Sat Jun 13 08:30:30 2015

1 . . . . . . . . 10 . . . . . . . . . 20 . . . . . . . . . 30 . . . . . . . . . 40 . . . . . . . . . 50 . . . . . . . . . 60 . . . . . . . . . 70

Sequence S X N T S L L P A E K D P X G A A I A D F Y H R Q K A D R L R V F S S Q F D E D E I P V K Q L F R K Q X P L L E R T A L A X A T G T I L D V

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
T T T
G G G
S
S S S
T G G G G
S

. . . . . . . . . 80 . . . . . . . . . 90 . . . . . . . . . 100 . . . . . . . . . 110 . . . . . . . . . 120 . . . . . . . . . 130 . . . . . . . . . 140

Sequence G A G S G C H A L A L Q E S G K E V S A I D I S P L S V E V X K L R G V K D A R Q V N L F D E R F A A T F D T I L X L X N G S G I I G R L E

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T
T T S T T
S
T
S S
T T
T T
T T T G G G G G
S G G

. . . . . . . . . 150 . . . . . . . . . 160 . . . . . . . . . 170 . . . . . . . . . 180 . . . . . . . . . 190 . . . . . . . . . 200 . . . . . . . . . 210

Sequence N X P L F F R K X K Q L L R P D G C I L X D S S D L R Y L F E D E D G S F D Y Y G E I D F R X Q Y K D I Q G D P F D W L Y I D F Q T L S A Y

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) G
G G G G
T T
T T T T

. . . . . . . . . 220 . . . . . . . . . 230 . . . . . . .

Sequence A A D N G F K A E X I K E G K H Y D Y L A R L T V A L

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T T
S S S

Download: PDB structure FASTA sequence
Hidden Markov model

Image coloured by rainbow N → C terminus

Interactive 3D view in JSmol

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Accessibility Statement

Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction

Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960

© Structural Bioinformatics Group, Imperial College, London

Michael Sternberg

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	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	S	X	N	T	S	L	L	P	A	E	K	D	P	X	G	A	A	I	A	D	F	Y	H	R	Q	K	A	D	R	L	R	V	F	S	S	Q	F	D	E	D	E	I	P	V	K	Q	L	F	R	K	Q	X	P	L	L	E	R	T	A	L	A	X	A	T	G	T	I	L	D	V
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)		T	T	T					G	G	G														S										S	S	S							T	G	G	G	G																	S
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	G	A	G	S	G	C	H	A	L	A	L	Q	E	S	G	K	E	V	S	A	I	D	I	S	P	L	S	V	E	V	X	K	L	R	G	V	K	D	A	R	Q	V	N	L	F	D	E	R	F	A	A	T	F	D	T	I	L	X	L	X	N	G	S	G	I	I	G	R	L	E
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	T		T	T	S									T	T								S												T		S	S						T	T		T	T											T	T	T	G	G	G	G	G		S	G	G
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	N	X	P	L	F	F	R	K	X	K	Q	L	L	R	P	D	G	C	I	L	X	D	S	S	D	L	R	Y	L	F	E	D	E	D	G	S	F	D	Y	Y	G	E	I	D	F	R	X	Q	Y	K	D	I	Q	G	D	P	F	D	W	L	Y	I	D	F	Q	T	L	S	A	Y
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	G																										G	G	G	G			T	T						T	T									T	T
	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.
Sequence	A	A	D	N	G	F	K	A	E	X	I	K	E	G	K	H	Y	D	Y	L	A	R	L	T	V	A	L
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)				T	T										S	S	S