Standard Mode | Switch to Expert Mode | Login to view past jobsRetrieve Phyre Job Id
 
Subscribe to Phyre at Google Groups
Email:
Visit Phyre at Google Groups
 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c5bo5B_

Fold library idPDB HeaderMoleculeTitle
c5bo5B_PDB header: hydrolaseChain: B: PDB Molecule: neq263;PDBTitle: structure of a unique atp synthase subunit neqb from nanoarcheaum2 equitans


Added to library: Sat Sep 19 08:16:51 2015
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence PPLIAVELENPMLGEVIDLEETKAIVIAAYENKALALLFDYTNRQGNTYKIAVSEDYIGGIFNGFGEPIK
Predicted secondary structure





































SS confidence





































































Known secondary structure (DSSP)


SS

TT

SS
TT





B


GGGTT

TTS
BSS
 .........80.........90.........100.........110.........120.........130.........140
Sequence GPKPYPEDYRDINGARKVPNEILYTGISSIDVAHPLLKGQKIAIFSPPGLPMERLALQIARNVAKDKTII
Predicted secondary structure





































SS confidence





































































Known secondary structure (DSSP) S




STT


B


S

S
TTS
TT
B

TTS
TTS
 .........150.........160.........170.........180.........190.........200.........210
Sequence FAAIGVPSDIYKMFIDEFINTKAIMNSAIFISKADSSPIEKIYTPRVALTLAEYLAFEKNRDVLVLMLDM
Predicted secondary structure



















SS confidence





































































Known secondary structure (DSSP)
TGGGGTTS
TTT

 .........220.........230.........240.........250.........260.........270.........280
Sequence TNYADALREISTLRKEIPSRRGYPAYLYTDLASIYERSGLTKGSITLIPMLTMPGNDITHVVPDLTGYIT
Predicted secondary structure























SS confidence





































































Known secondary structure (DSSP) TTSTTS
TTTTTS




TTS
TTSS
 .........290.........300.........310.........320.........330.........340.........350
Sequence EGQYVLSQDLHSKNIYPPIDLLKSLSRLAKNGMSKKHKKYADILIKSYAKGLEARDIATIVGEDSLSKED
Predicted secondary structure























SS confidence





































































Known secondary structure (DSSP) S
TT
SS
TTGGGT


GGGS
 .........360.........370.........380.........390..
Sequence KAYLKFAELVEKEFIKQDYYEYRSIEKSFEIIDSILSQSGLP
Predicted secondary structure














SS confidence









































Known secondary structure (DSSP) TT


TT



T


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


Phyre is now FREE for commercial users!

All images and data generated by Phyre2 are free to use in any publication with acknowledgement

Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
© Structural Bioinformatics Group, Imperial College, London
Michael Sternberg 
Disclaimer
Terms and Conditions
Structural Biology Group logo Imperial logo
BBSRC logo
Phyre2 is part of Genome3D