PHYRE Protein Fold Recognition Server

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Protein Homology/analogY Recognition Engine V 2.2

Fold library entry viewer: c5bncB_

Fold library id	PDB Header	Molecule	Title
c5bncB_	PDB header: heme binding protein	Chain: B: PDB Molecule: heme binding protein msmeg_6519;	PDBTitle: structure of heme binding protein msmeg_6519 from mycobacterium2 smegmatis

Links to external resources
Added to library: Sat Oct 24 14:01:20 2015

1 . . . . . . . . 10 . . . . . . . . . 20 . . . . . . . . . 30 . . . . . . . . . 40 . . . . . . . . . 50 . . . . . . . . . 60 . . . . . . . . . 70

Sequence V V R P S A A E E A R T I A A S T N V G T L A T L T T E G D P W A S F V T Y G L L G G A P V L C V S D M A E H G R N L A H D P R A S I A I V

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
T
S
T T
T T T T S

. . . . . . . . . 80 . . . . . . . . . 90 . . . . . . . . . 100 . . . . . . . . . 110 . . . . . . . . . 120 . . . . . . . . . 130 . . . . . . . . . 140

Sequence A P S A E S D P L A S A R V T L A G V A E R P E G D E L A A A R A A H L D A V A A A K Y Y I D Y S D F S V W V L R V Q R V R W V G G Y G R M

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
S
S
G G G
G G G G G T T T S T T S T T

. . . . . . . . . 150 . . . . . . . . . 160 . . . . . . . . . 170 . . . . . . . . . 180 . . . . . . . . . 190 . . . . . . . . . 200 . . . . . . . . . 210

Sequence D S T T G E A Y A A A E A D P V T P R A A G A I A H L N A D H A D S L L A M A R N L G G Y P D T G E A V C T G A D R Y G L D L R V T T E R G

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) S
S S G G G
T S S
T T
S
S S T T

. . . . . . . . . 220 . . . . . . . . . 230 . . . . . . . . . 240 . .

Sequence V A Y T R V G Y A A P I S S F D Q L R A A T V E L A Q R A K Q S

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
S S
S T T T

Download: PDB structure FASTA sequence
Hidden Markov model

Image coloured by rainbow N → C terminus

Interactive 3D view in JSmol

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Accessibility Statement

Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction

Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960

© Structural Bioinformatics Group, Imperial College, London

Michael Sternberg

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	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	V	V	R	P	S	A	A	E	E	A	R	T	I	A	A	S	T	N	V	G	T	L	A	T	L	T	T	E	G	D	P	W	A	S	F	V	T	Y	G	L	L	G	G	A	P	V	L	C	V	S	D	M	A	E	H	G	R	N	L	A	H	D	P	R	A	S	I	A	I	V
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)																T		S									T	T														T	T								T	T	S
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	A	P	S	A	E	S	D	P	L	A	S	A	R	V	T	L	A	G	V	A	E	R	P	E	G	D	E	L	A	A	A	R	A	A	H	L	D	A	V	A	A	A	K	Y	Y	I	D	Y	S	D	F	S	V	W	V	L	R	V	Q	R	V	R	W	V	G	G	Y	G	R	M
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)				S		S		G	G	G																														G	G	G	G	G	T	T	T	S	T	T																S	T	T
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	D	S	T	T	G	E	A	Y	A	A	A	E	A	D	P	V	T	P	R	A	A	G	A	I	A	H	L	N	A	D	H	A	D	S	L	L	A	M	A	R	N	L	G	G	Y	P	D	T	G	E	A	V	C	T	G	A	D	R	Y	G	L	D	L	R	V	T	T	E	R	G
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)											S				S	S	G	G	G																							T	S	S		T	T		S									S	S									T	T
	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.
Sequence	V	A	Y	T	R	V	G	Y	A	A	P	I	S	S	F	D	Q	L	R	A	A	T	V	E	L	A	Q	R	A	K	Q	S
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)									S	S				S	T	T															T