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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c5bn4A_

Fold library idPDB HeaderMoleculeTitle
c5bn4A_PDB header: hydrolaseChain: A: PDB Molecule: v-type atp synthase alpha chain;PDBTitle: structure of a unique atp synthase neqa-neqb in complex with anp from2 nanoarcheaum equitans


Added to library: Sat Sep 19 10:02:23 2015
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence MNRIISINGPLVIAKGKFSIFEVVRVGEEKLIGEVIGIENDKAYIQVYEDTNGLKVGEPVFNTGKPLTIE
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Known secondary structure (DSSP)

TTS


TT
TTTTTTSS

TT

TT



SS
S
 .........80.........90.........100.........110.........120.........130.........140
Sequence LGPGLLANIFDGLGRPLKDIYEKTQSIYIPKGIDLPTLDRKKVWEFIPKKKKGDTIKGGDIIGTVNENGF
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Known secondary structure (DSSP) SSS
TT
TT

B
SSS

TT



SS
SS

SS
TT

TT
TT
 .........150.........160.........170.........180.........190.........200.........210
Sequence EHRIIVPPNVEGKIEEIYEGNFTIEETIAIVNGKPIKLYHEWPIRKPRPYKEKLDYNYPFITGTRVLDIM
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Known secondary structure (DSSP)

TT




TTS

TT
S
TTS



S



SB


S
TT
 .........220.........230.........240.........250.........260.........270.........280
Sequence FPIAKGGSAAVPGPFGSGKTVLNQQIAKWADSDIVIYIGCGERGNEMTEVLEEFPKLKDPKTGKPLMYRT
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Known secondary structure (DSSP) S

BTT


TTSS
S
SS

GGG
B
TTT
SBGGGG
 .........290.........300.........310.........320.........330.........340.........350
Sequence ILIANTSNMPIAAREASIYLGATIGEYFRDQGYSVVVNADSTSRWAEALREISSRLGEIPSEEGYPAYLL
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Known secondary structure (DSSP)
TTS
TTTT
TTT



GGG

TT
 .........360.........370.........380.........390.........400.........410.........420
Sequence RKLAEFYERSGRVRTLNDLEGSLTIIGAVSPPGGDFSEPVTQNTLRLVGALWALDSKLAYKRHYPAINYL
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Known secondary structure (DSSP) TT

TTS


GGG
TTSTTTSS

B
TT
SS
B
TT
 .........430.........440.........450.........460.........470.........480.........490
Sequence ISYTKQWEFVKKYFEELYEDVIEIREEFFAILKRESELMDIVSIVGPDALSDNEKIYLHMGRIIREGFLQ
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Known secondary structure (DSSP) T
S

TTTT
TTSS
TT
 .........500.........510.........520.........530.........540.........550.........560
Sequence QDAFDENDSYSPLEKTIELMRIIHKYYVTVKQLLGKIPLEEIEQKGIHEKIIKLRYKSLKEFREEIKAIE
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Known secondary structure (DSSP)

TTSTTTS


TTTTTS
T
SGGGGS
 .......
Sequence QEILSLL
Predicted secondary structure
SS confidence






Known secondary structure (DSSP)





Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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