PHYRE Protein Fold Recognition Server

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Protein Homology/analogY Recognition Engine V 2.0

Fold library entry viewer: c5bmtB_

Fold library id	PDB Header	Molecule	Title
c5bmtB_	PDB header: unknown function	Chain: B: PDB Molecule: uncharacterized protein;	PDBTitle: crystal structure of an uncharacterized protein (parmer_03598) from2 parabacteroides merdae atcc 43184 at 1.50 a resolution

Links to external resources
Added to library: Sat Jun 13 08:22:59 2015

1 . . . . . . . . 10 . . . . . . . . . 20 . . . . . . . . . 30 . . . . . . . . . 40 . . . . . . . . . 50 . . . . . . . . . 60 . . . . . . . . . 70

Sequence Q L S S Y A I V D Y S S T X R T L I Y P L G Y Y P L Y V A T I A N D P T Y R A G D C V L A N F T V D F D S A D N A N A S T N G F Y V A T G A

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
T T S
T T S
T
T T
T T
T T S G G G T T T S

. . . . . . . . . 80 . . . . . . . . . 90 . . . . . . . . . 100 . . . . . . . . . 110 . . . . . . . . . 120 . . . . . . . . . 130 . . . . . . . . . 140

Sequence A S S P L A K Y D L S Y S P L D S X A L D N E L L L S G S E S A L L F S N N Y K R I V V I P T F T S V L T D Q K N T Y I X S X D S N Q E P E

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
S S
S B
T T
S
S S
T
T T

. . . . . . . . . 150 . . . . . . . . . 160 . . . . . . . . . 170 . . . . . . . . . 180 . . . . . . . . . 190 . . . . . . . . . 200 . . . . . . . . . 210

Sequence T V D G T D R V Y T L C L R A Q K R E E G K A P T I S N A X D P I A V E G G T L Y S X L K G K E S A A G K K I V S Y R V K Y P L T F N A D S

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T T
T T
S
T T S

. . . . . . . . . 220 . . . . . . . .

Sequence T K I A T W G Y S K I S Q F S I E E

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) S B
-

Download: PDB structure FASTA sequence
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Please cite: The Phyre2 web portal for protein modeling, prediction and analysis

Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]

© Structural Bioinformatics Group, Imperial College, London

Michael Sternberg

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	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	Q	L	S	S	Y	A	I	V	D	Y	S	S	T	X	R	T	L	I	Y	P	L	G	Y	Y	P	L	Y	V	A	T	I	A	N	D	P	T	Y	R	A	G	D	C	V	L	A	N	F	T	V	D	F	D	S	A	D	N	A	N	A	S	T	N	G	F	Y	V	A	T	G	A
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)												T	T	S							T	T	S										T		T	T			T	T											T	T	S	G	G	G	T	T					T	S
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	A	S	S	P	L	A	K	Y	D	L	S	Y	S	P	L	D	S	X	A	L	D	N	E	L	L	L	S	G	S	E	S	A	L	L	F	S	N	N	Y	K	R	I	V	V	I	P	T	F	T	S	V	L	T	D	Q	K	N	T	Y	I	X	S	X	D	S	N	Q	E	P	E
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)												S	S				S	B			T	T					S										S	S																T											T	T
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	T	V	D	G	T	D	R	V	Y	T	L	C	L	R	A	Q	K	R	E	E	G	K	A	P	T	I	S	N	A	X	D	P	I	A	V	E	G	G	T	L	Y	S	X	L	K	G	K	E	S	A	A	G	K	K	I	V	S	Y	R	V	K	Y	P	L	T	F	N	A	D	S
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)			T	T																																															T	T		S														T	T	S
	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.
Sequence	T	K	I	A	T	W	G	Y	S	K	I	S	Q	F	S	I	E	E
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	S	B																-