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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c5b7iA_

Fold library idPDB HeaderMoleculeTitle
c5b7iA_2.60PDB header: hydrolase/unknown functionChain: A: PDB Molecule: crispr-associated nuclease/helicase cas3 subtype i-f/ypest;


Added to library: Sat Jul 9 08:34:25 2016
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence SEFXNILLVSQCEKRALSETRRILDQFAERRGERTWQTPITQAGLDTLRRLLKKSARRNTAVACHWIRGR
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Known secondary structure (DSSP)





S
B
SSS
T

TT

SS
 .........80.........90.........100.........110.........120.........130.........140
Sequence DHSELLWIVGDASRFNAQGAVNDWHSAEDIRLLTVXAALFHDIGKASQAFQAKLRNRGKPXADAYRHEWV
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Known secondary structure (DSSP) S

STTB
SSSB



TTTTGGGGS

SS



SS
 .........150.........160.........170.........180.........190.........200.........210
Sequence SLRLFEAFVGPGSSDEDWLRRLADKRETGDAWLSQLARDDRQSAPPGPFQKSRLPPLAQAVGWLIVSHHR
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Known secondary structure (DSSP)
TT


TT


SGGGGS


TTSSS



TTSTTSS
TSSB
 .........220.........230.........240.........250.........260.........270.........280
Sequence LPNGDHRGSASLARLPAPIQSQWCGARDADAKEKAACWQFPHGLPFASAHWRARTALCAQSXLERPGLLA
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Known secondary structure (DSSP)



S


TTTT

GGGTTTTS

SS
SSTTS

SS

GGG
TSTT
 .........290.........300.........310.........320.........330.........340.........350
Sequence RGPALLHDSYVXHVSRLILXLADHHYSSLPADSRLGDPNFPLHANTDRDSGKLKQRLDEHLLGVALHSRK
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Known secondary structure (DSSP) T
S


TTSS
TT


BS
B
SSS

B
SB
 .........360.........370.........380.........390.........400.........410.........420
Sequence LAGTLPRLERQLPRLARHKGFTRRVEQPRFRWQDKAYDCAXACREQAXEHGFFGLNLASTGCGKTLANGR
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Known secondary structure (DSSP) GGGS

B


S


STTS



TTS
 .........430.........440.........450.........460.........470.........480.........490
Sequence ILYALADPQRGARFSIALGLRSLTLQTGQAYRERLGLGDDDLAILVGGSAQELLAENSHVHFAGTLEDGP
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Known secondary structure (DSSP) SBTTTBB
SSS
B
T

TTTB





S
SS


S

TT
T
 .........500.........510.........520.........530.........540.........550.........560
Sequence LREWLGGNSAGNRLLQAPILACTIDHLXPASESLRGGHQIAPLLRLXTSDLVLDEVDDFDIDDLPALSRL
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Known secondary structure (DSSP) TTTTS
SSS
ST

BTTTTSTGGGS
GGG
 .........570.........580.........590.........600.........610.........620.........630
Sequence VHWAGLFGSRVLLSSATLPPALVQGLFEAYRSGREIFQRHRGAPGRATEIRCAWFDEFSSQSSAHGAVTS
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Known secondary structure (DSSP) TT


TT

SSSSTT




SS
SS
 .........640.........650.........660.........670.........680.........690.........700
Sequence FSEAHATFVAQRLAKLEQLPPRRQAQLCTVHAAGEARPALCRELAGQXNTWXADLHRCHHTEHQGRRISF
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Known secondary structure (DSSP) TS








SS

S
TT
 .........710.........720.........730.........740.........750.........760.........770
Sequence GLLRLANIEPLIELAQAILAQGAPEGLHVHLCVYHSRHPLLVRSAIERQLDELLKRSDDDAAALFARPTL
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Known secondary structure (DSSP)
S
S


TT
SSS
T


TT
S
 .........780.........790.........800.........810.........820.........830.........840
Sequence AKALQASTERDHLFVVLASPVAEVGRDHDYDWAIVEPSSXRSIIQLAGRIRRHRSGFSGEANLYLLSRNI
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Known secondary structure (DSSP)
S
S
GGGSSS



BS

S
TTBSSS





S

SS
 .........850.........860.........870.........880.........890.........900.........910
Sequence RSLEGQNPAFQRPGFETPDFPLDSHDLHDLLDPALLARIDASPRIVEPFPLFPRSRLVDLEHRRLRALXL
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Known secondary structure (DSSP) TT
SS
S
SSSS

SSS

S


S
GGGTT

SSS

SS

TTT
SS
 .........920.........930.........940.........950.........960.........970.........980
Sequence ADDPPSSLLGVPLWWQTPASLSGALQTSQPFRAGAKERCYALLPDEDDEERLHFSRYEEGTWSNQDNLLR
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Known secondary structure (DSSP)
SS
TTT
S
TTSGGGGSSS
TT
SS
B


SS
TT

SSS
GGG
 .........990.........1000.........1010.........1020.........1030.........1040....
Sequence NLDLTYGPRIQTWGTVNYREELVAXAGREDLDLRQCAXRYGEVRLRENTQGWSYHPYLGFKKYN
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Known secondary structure (DSSP)





TT
S


S




B

B

TT
TTT


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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