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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c5b68A_

Fold library idPDB HeaderMoleculeTitle
c5b68A_1.70PDB header: transferaseChain: A: PDB Molecule: 4-alpha-glucanotransferase;


Added to library: Thu Feb 9 15:18:56 2017
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence RRFLNELADLYGVATSYTDYKGAHIEVSDDTLVKILRALGVNLDTSNLPNDDAIQRQIALFHDREFTRPL
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Known secondary structure (DSSP)
TTB
S
TTS


TT



TTS


T
SS
 .........80.........90.........100.........110.........120.........130.........140
Sequence PPSVVAVEGDELVFPVHVHDGSPADVHIELEDGTQRDVSQVENWTAPREIDGIRWGEASFKIPGDLPLGW
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Known secondary structure (DSSP)
STT


TTS


TTS







TT

TT

S
 .........150.........160.........170.........180.........190.........200.........210
Sequence HKLHLKSNERSAECGLIITPARLSTADKYLDSPRSGVMAQIYSVRSTLSWGMGDFNDLGNLASVVAQDGA
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Known secondary structure (DSSP) TT
SS
S

GGG


SSSSSS

TTT
 .........220.........230.........240.........250.........260.........270.........280
Sequence DFLLINPMHAAEPLPPTEDSPYLPTTRRFINPIYIRVEDIPEFNQLEIDLRDDIAEMAAEFRERNLTSDI
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Known secondary structure (DSSP) S


B


SSSS

S
TTS
S
SSSB
GGG

GGGSGGGGGS
TTS


 .........290.........300.........310.........320.........330.........340.........350
Sequence IERNDVYAAKLQVLRAIFEMPRSSEREANFVSFVQREGQGLIDFATWCADRETAQSESVHGTEPDRDELT
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Known secondary structure (DSSP)

TS


S


TT



 .........360.........370.........380.........390.........400.........410.........420
Sequence MFYMWLQWLCDEQLAAAQKRAVDAGMSIGIMADLAVGVHPGGADAQNLSHVLAPDASVGAPPDGYNQQGQ
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Known secondary structure (DSSP) TT
SS
S


TTSTGGGB
TT


SSSTT
 .........430.........440.........450.........460.........470.........480.........490
Sequence DWSQPPWHPVRLAEEGYIPWRNLLRTVLRHSGGIRVDHVLGLFRLFVMPRMQSPATGTYIRFDHNALVGI
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Known secondary structure (DSSP)




B
TTTTTT
STTGGGGTTTS
GGG


 .........500.........510.........520.........530.........540.........550.........560
Sequence LALEAELAGAVVIGEDLGTFEPWVQDALAQRGIMGTSILWFEHSPSQPGPRRQEEYRPLALTTVTTHDLP
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Known secondary structure (DSSP) TT



S


TT
BGGG
B
SSSSSB

GGGS
SSS

TTS
 .........570.........580.........590.........600.........610.........620.........630
Sequence PTAGYLEGEHIALRERLGVLNTDPAAELAEDLQWQAEILDVAASANALPAREYVGLERDQRGELAELLEG
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Known secondary structure (DSSP)
TTTT


S
TTSS




TT

GGGS

 .........640.........650.........660.........670.........680.........690.........700
Sequence LHTFVAKTPSALTCVCLVDMVGEKRAQNQPGTTRDMYPNWCIPLCDSEGNSVLIESLRENELYHRVAKAS
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Known secondary structure (DSSP) TSS
ST

S
S

TT

TTTS
TT



B
TTS
B

GGGGGGST
 ...
Sequence KRD
Predicted secondary structure

SS confidence


Known secondary structure (DSSP)



Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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