PHYRE Protein Fold Recognition Server

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Protein Homology/analogY Recognition Engine V 2.2

Fold library entry viewer: c5b43A_

Fold library id	PDB Header	Molecule	Title
c5b43A_	2.80	PDB header: hydrolase/rna/dna	Chain: A: PDB Molecule: crispr-associated endonuclease cpf1;

Links to external resources
Added to library: Sat May 7 08:28:03 2016

1 . . . . . . . . 10 . . . . . . . . . 20 . . . . . . . . . 30 . . . . . . . . . 40 . . . . . . . . . 50 . . . . . . . . . 60 . . . . . . . . . 70

Sequence M T Q F E G F T N L Y Q V S K T L R F E L I P Q G K T L K H I Q E Q G F I E E D K A R N D H Y K E L K P I I D R I Y K T Y A D Q C L Q L V Q

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
G G G S B S S S
T T T T

. . . . . . . . . 80 . . . . . . . . . 90 . . . . . . . . . 100 . . . . . . . . . 110 . . . . . . . . . 120 . . . . . . . . . 130 . . . . . . . . . 140

Sequence L D W E N L S A A I D S Y R K E K T E E T R N A L I E E Q A T Y R N A I H D Y F I G R T D N L T D A I N K R H A E I Y K G L F K A E L F N G

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
T S
T
T T S
T T S S G G G T T S

. . . . . . . . . 150 . . . . . . . . . 160 . . . . . . . . . 170 . . . . . . . . . 180 . . . . . . . . . 190 . . . . . . . . . 200 . . . . . . . . . 210

Sequence K V L K Q L T T T E H E N A L L R S F D K F T T Y F S G F Y E N R K N V F S A E D I S T A I P H R I V Q D N F P K F K E N C H I F T R L I T

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
G G G T T
G G G G
S S
T T S T

. . . . . . . . . 220 . . . . . . . . . 230 . . . . . . . . . 240 . . . . . . . . . 250 . . . . . . . . . 260 . . . . . . . . . 270 . . . . . . . . . 280

Sequence A V P S L R E H F E N V K K A I G I F V S T S I E E V F S F P F Y N Q L L T Q T Q I D L Y N Q L L G G I S R E A G T E K I K G L N E V L N L

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
T T S
T T S
T T T T T S G G G G G G
S S
B
S T T S
B

. . . . . . . . . 290 . . . . . . . . . 300 . . . . . . . . . 310 . . . . . . . . . 320 . . . . . . . . . 330 . . . . . . . . . 340 . . . . . . . . . 350

Sequence A I Q K N D E T A H I I A S L P H R F I P L F K Q I L S D R N T L S F I L E E F K S D E E V I Q S F C K Y K T L L R N E N V L E T A E A L F

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T
S S
T T
S S
S T

. . . . . . . . . 360 . . . . . . . . . 370 . . . . . . . . . 380 . . . . . . . . . 390 . . . . . . . . . 400 . . . . . . . . . 410 . . . . . . . . . 420

Sequence N E L N S I D L T H I F I S H K K L E T I S S A L C D H W D T L R N A L Y E R R I S E L T G K I T K S A K E K V Q R S L K H E D I N L Q E I

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T T T S
G G G
S S S S T T
S S
S S

. . . . . . . . . 430 . . . . . . . . . 440 . . . . . . . . . 450 . . . . . . . . . 460 . . . . . . . . . 470 . . . . . . . . . 480 . . . . . . . . . 490

Sequence I S A A G K E L S E A F K Q K T S E I L S H A H A A L D Q P L P T T L K K Q E E K E I L K S Q L D S L L G L Y H L L D W F A V D E S N E V D

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
S S
S
S
S T T B
S T T S

. . . . . . . . . 500 . . . . . . . . . 510 . . . . . . . . . 520 . . . . . . . . . 530 . . . . . . . . . 540 . . . . . . . . . 550 . . . . . . . . . 560

Sequence P E F S A R L T G I K L E M E P S L S F Y N K A R N Y A T K K P Y S V E K F K L N F Q M P T L A S G W D V N K E K N N G A I L F V K N G L Y

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) S T T S
T T
T T T T S
B G G G
T T

. . . . . . . . . 570 . . . . . . . . . 580 . . . . . . . . . 590 . . . . . . . . . 600 . . . . . . . . . 610 . . . . . . . . . 620 . . . . . . . . . 630

Sequence Y L G I M P K Q K G R Y K A L S F E P T E K T S E G F D K M Y Y D Y F P D A A K M I P K C S T Q L K A V T A H F Q T H T T P I L L S N N F I

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
B T T B
B
T T S S S
T T T
S
T T B S

. . . . . . . . . 640 . . . . . . . . . 650 . . . . . . . . . 660 . . . . . . . . . 670 . . . . . . . . . 680 . . . . . . . . . 690 . . . . . . . . . 700

Sequence E P L E I T K E I Y D L N N P E K E P K K F Q T A Y A K K T G D Q K G Y R E A L C K W I D F T R D F L S K Y T K T T S I D L S S L R P S S Q

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) S
S S S S
T T S T
B T T T T T S
T T S
G G G

. . . . . . . . . 710 . . . . . . . . . 720 . . . . . . . . . 730 . . . . . . . . . 740 . . . . . . . . . 750 . . . . . . . . . 760 . . . . . . . . . 770

Sequence Y K D L G E Y Y A E L N P L L Y H I S F Q R I A E K E I M D A V E T G K L Y L F Q I Y N K D F A K G H H G K P N L H T L Y W T G L F S P E N

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
S S G G G G B
S S S
G G G S T T
S
T S

. . . . . . . . . 780 . . . . . . . . . 790 . . . . . . . . . 800 . . . . . . . . . 810 . . . . . . . . . 820 . . . . . . . . . 830 . . . . . . . . . 840

Sequence L A K T S I K L N G Q A E L F Y R P K S R M E K M L N K K L K D Q K T P I P D T L Y Q E L Y D Y V N H R L S H D L S D E A R A L L P N V I T

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) S
S S
S
S B
S S S S S B
T T
S
T S T T

. . . . . . . . . 850 . . . . . . . . . 860 . . . . . . . . . 870 . . . . . . . . . 880 . . . . . . . . . 890 . . . . . . . . . 900 . . . . . . . . . 910

Sequence K E V S H E I I K D R R F T S D K F F F H V P I T L N Y Q A A N S P S K F N Q R V N A Y L K E H P E T P I I G I D R G E R N L I Y I T V I D

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
S S
T T
G G G S
S T T S
S S
S S
T T
S S
S

. . . . . . . . . 920 . . . . . . . . . 930 . . . . . . . . . 940 . . . . . . . . . 950 . . . . . . . . . 960 . . . . . . . . . 970 . . . . . . . . . 980

Sequence S T G K I L E Q R S L N T I Q Q F D Y Q K K L D N R E K E R V A A R Q A W S V V G T I K D L K Q G Y L S Q V I H E I V D L M I H Y Q A V V V

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T T S
S T T T T
S T

. . . . . . . . . 990 . . . . . . . . . 1000 . . . . . . . . . 1010 . . . . . . . . . 1020 . . . . . . . . . 1030 . . . . . . . . . 1040 . . . . . . . . . 1050

Sequence L E N L A V Y Q Q F E K M L I D K L N C L V L K D Y P A E K V G G V L N P Y Q L T D Q F T S F A K M G T Q S G F L F Y V P A P Y T S K I D P

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
S B
T T S
T T S T T S T T S
B
S
S T T
S T T
T T S S S S
T

. . . . . . . . . 1060 . . . . . . . . . 1070 . . . . . . . . . 1080 . . . . . . . . . 1090 . . . . . . . . . 1100 . . . . . . . . . 1110 . . . . . . . . . 1120

Sequence L T G F V D P F V W K T I K N H E S R K H F L E G F D F L H Y D V K T G D F I L H F K M N R N L S F Q R G L P G F M P A W D I V F E K N E T

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T T
B
T T S
S T
T T T
S T T S
G G G B
S
S
S

. . . . . . . . . 1130 . . . . . . . . . 1140 . . . . . . . . . 1150 . . . . . . . . . 1160 . . . . . . . . . 1170 . . . . . . . . . 1180 . . . . . . . . . 1190

Sequence Q F D A K G T P F I A G K R I V P Y R D L Y P A N E L I A L L E E K G I V F R D G S N I L P K L L E N D D S H A I D T M V A L I R S V L Q M

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
T T
T T
T
T T
T
T

. . . . . . . . . 1200 . . . . . . . . . 1210 . . . . . . . . . 1220 . . . . . . . . . 1230 . . . . . . . . . 1240 . . . . . . . . . 1250 . . . . . . . . . 1260

Sequence R N S N A A T G E D Y I N S P V R D L N G V C F D S R F Q N P E W P M D A D A N G A Y H I A L K G Q L L L N H L K E S K D L K L Q N G I S N

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T T T T B
S B
T T S
B G G G
T T S
S S S S S S
S

. . . . . . . . . 1270 . .

Sequence Q D W L A Y I Q E L R N

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)

Download: PDB structure FASTA sequence
Hidden Markov model

Image coloured by rainbow N → C terminus

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Accessibility Statement

Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction

Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960

© Structural Bioinformatics Group, Imperial College, London

Michael Sternberg

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	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	M	T	Q	F	E	G	F	T	N	L	Y	Q	V	S	K	T	L	R	F	E	L	I	P	Q	G	K	T	L	K	H	I	Q	E	Q	G	F	I	E	E	D	K	A	R	N	D	H	Y	K	E	L	K	P	I	I	D	R	I	Y	K	T	Y	A	D	Q	C	L	Q	L	V	Q
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)				G	G	G	S	B	S	S	S														T	T									T																																	T
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	L	D	W	E	N	L	S	A	A	I	D	S	Y	R	K	E	K	T	E	E	T	R	N	A	L	I	E	E	Q	A	T	Y	R	N	A	I	H	D	Y	F	I	G	R	T	D	N	L	T	D	A	I	N	K	R	H	A	E	I	Y	K	G	L	F	K	A	E	L	F	N	G
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)			T													S																										T			T	T	S														T	T	S	S	G	G	G	T	T	S
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	K	V	L	K	Q	L	T	T	T	E	H	E	N	A	L	L	R	S	F	D	K	F	T	T	Y	F	S	G	F	Y	E	N	R	K	N	V	F	S	A	E	D	I	S	T	A	I	P	H	R	I	V	Q	D	N	F	P	K	F	K	E	N	C	H	I	F	T	R	L	I	T
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)																	G	G	G	T	T		G	G	G	G														S	S		T	T	S								T
	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280
Sequence	A	V	P	S	L	R	E	H	F	E	N	V	K	K	A	I	G	I	F	V	S	T	S	I	E	E	V	F	S	F	P	F	Y	N	Q	L	L	T	Q	T	Q	I	D	L	Y	N	Q	L	L	G	G	I	S	R	E	A	G	T	E	K	I	K	G	L	N	E	V	L	N	L
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)			T														T	S		T	T	S		T	T	T	T	T	S	G	G	G	G	G	G		S	S														B			S	T	T	S			B
	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350
Sequence	A	I	Q	K	N	D	E	T	A	H	I	I	A	S	L	P	H	R	F	I	P	L	F	K	Q	I	L	S	D	R	N	T	L	S	F	I	L	E	E	F	K	S	D	E	E	V	I	Q	S	F	C	K	Y	K	T	L	L	R	N	E	N	V	L	E	T	A	E	A	L	F
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)				T		S									S											T	T						S	S								S																			T
	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420
Sequence	N	E	L	N	S	I	D	L	T	H	I	F	I	S	H	K	K	L	E	T	I	S	S	A	L	C	D	H	W	D	T	L	R	N	A	L	Y	E	R	R	I	S	E	L	T	G	K	I	T	K	S	A	K	E	K	V	Q	R	S	L	K	H	E	D	I	N	L	Q	E	I
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)			T	T	T	S		G	G	G																S	S	S	S													T	T			S	S															S	S
	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490
Sequence	I	S	A	A	G	K	E	L	S	E	A	F	K	Q	K	T	S	E	I	L	S	H	A	H	A	A	L	D	Q	P	L	P	T	T	L	K	K	Q	E	E	K	E	I	L	K	S	Q	L	D	S	L	L	G	L	Y	H	L	L	D	W	F	A	V	D	E	S	N	E	V	D
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)																												S	S				S		S		S																						T	T	B			S	T	T	S
	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560
Sequence	P	E	F	S	A	R	L	T	G	I	K	L	E	M	E	P	S	L	S	F	Y	N	K	A	R	N	Y	A	T	K	K	P	Y	S	V	E	K	F	K	L	N	F	Q	M	P	T	L	A	S	G	W	D	V	N	K	E	K	N	N	G	A	I	L	F	V	K	N	G	L	Y
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)														S	T														T	S												T	T		T	T	T	T	S			B	G	G	G												T	T
	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630
Sequence	Y	L	G	I	M	P	K	Q	K	G	R	Y	K	A	L	S	F	E	P	T	E	K	T	S	E	G	F	D	K	M	Y	Y	D	Y	F	P	D	A	A	K	M	I	P	K	C	S	T	Q	L	K	A	V	T	A	H	F	Q	T	H	T	T	P	I	L	L	S	N	N	F	I
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)								B	T	T	B								B			T	T	S	S	S																				T	T	T													S						T	T	B	S
	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.	.	.	.	690	.	.	.	.	.	.	.	.	.	700
Sequence	E	P	L	E	I	T	K	E	I	Y	D	L	N	N	P	E	K	E	P	K	K	F	Q	T	A	Y	A	K	K	T	G	D	Q	K	G	Y	R	E	A	L	C	K	W	I	D	F	T	R	D	F	L	S	K	Y	T	K	T	T	S	I	D	L	S	S	L	R	P	S	S	Q
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	S															S	S	S	S		T	T	S							T																								B	T	T	T	T	T	S			T	T	S			G	G	G
	.	.	.	.	.	.	.	.	.	710	.	.	.	.	.	.	.	.	.	720	.	.	.	.	.	.	.	.	.	730	.	.	.	.	.	.	.	.	.	740	.	.	.	.	.	.	.	.	.	750	.	.	.	.	.	.	.	.	.	760	.	.	.	.	.	.	.	.	.	770
Sequence	Y	K	D	L	G	E	Y	Y	A	E	L	N	P	L	L	Y	H	I	S	F	Q	R	I	A	E	K	E	I	M	D	A	V	E	T	G	K	L	Y	L	F	Q	I	Y	N	K	D	F	A	K	G	H	H	G	K	P	N	L	H	T	L	Y	W	T	G	L	F	S	P	E	N
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)		S	S									G	G	G	G								B											S	S	S									G	G	G	S	T	T			S													T	S
	.	.	.	.	.	.	.	.	.	780	.	.	.	.	.	.	.	.	.	790	.	.	.	.	.	.	.	.	.	800	.	.	.	.	.	.	.	.	.	810	.	.	.	.	.	.	.	.	.	820	.	.	.	.	.	.	.	.	.	830	.	.	.	.	.	.	.	.	.	840
Sequence	L	A	K	T	S	I	K	L	N	G	Q	A	E	L	F	Y	R	P	K	S	R	M	E	K	M	L	N	K	K	L	K	D	Q	K	T	P	I	P	D	T	L	Y	Q	E	L	Y	D	Y	V	N	H	R	L	S	H	D	L	S	D	E	A	R	A	L	L	P	N	V	I	T
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)			S		S	S				S																		S	B		S	S	S	S	S	B														T	T				S									T	S	T	T
	.	.	.	.	.	.	.	.	.	850	.	.	.	.	.	.	.	.	.	860	.	.	.	.	.	.	.	.	.	870	.	.	.	.	.	.	.	.	.	880	.	.	.	.	.	.	.	.	.	890	.	.	.	.	.	.	.	.	.	900	.	.	.	.	.	.	.	.	.	910
Sequence	K	E	V	S	H	E	I	I	K	D	R	R	F	T	S	D	K	F	F	F	H	V	P	I	T	L	N	Y	Q	A	A	N	S	P	S	K	F	N	Q	R	V	N	A	Y	L	K	E	H	P	E	T	P	I	I	G	I	D	R	G	E	R	N	L	I	Y	I	T	V	I	D
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)				S	S				T	T		G	G	G	S												S	T	T	S		S	S		S	S													T	T										S	S		S
	.	.	.	.	.	.	.	.	.	920	.	.	.	.	.	.	.	.	.	930	.	.	.	.	.	.	.	.	.	940	.	.	.	.	.	.	.	.	.	950	.	.	.	.	.	.	.	.	.	960	.	.	.	.	.	.	.	.	.	970	.	.	.	.	.	.	.	.	.	980
Sequence	S	T	G	K	I	L	E	Q	R	S	L	N	T	I	Q	Q	F	D	Y	Q	K	K	L	D	N	R	E	K	E	R	V	A	A	R	Q	A	W	S	V	V	G	T	I	K	D	L	K	Q	G	Y	L	S	Q	V	I	H	E	I	V	D	L	M	I	H	Y	Q	A	V	V	V
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	T	T	S									S			T	T																				T	T						S																							T
	.	.	.	.	.	.	.	.	.	990	.	.	.	.	.	.	.	.	.	1000	.	.	.	.	.	.	.	.	.	1010	.	.	.	.	.	.	.	.	.	1020	.	.	.	.	.	.	.	.	.	1030	.	.	.	.	.	.	.	.	.	1040	.	.	.	.	.	.	.	.	.	1050
Sequence	L	E	N	L	A	V	Y	Q	Q	F	E	K	M	L	I	D	K	L	N	C	L	V	L	K	D	Y	P	A	E	K	V	G	G	V	L	N	P	Y	Q	L	T	D	Q	F	T	S	F	A	K	M	G	T	Q	S	G	F	L	F	Y	V	P	A	P	Y	T	S	K	I	D	P
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)																				S	B			T	T	S		T	T	S	T	T	S	T	T	S		B			S						S	T	T			S			T	T							T	T	S	S	S	S		T
	.	.	.	.	.	.	.	.	.	1060	.	.	.	.	.	.	.	.	.	1070	.	.	.	.	.	.	.	.	.	1080	.	.	.	.	.	.	.	.	.	1090	.	.	.	.	.	.	.	.	.	1100	.	.	.	.	.	.	.	.	.	1110	.	.	.	.	.	.	.	.	.	1120
Sequence	L	T	G	F	V	D	P	F	V	W	K	T	I	K	N	H	E	S	R	K	H	F	L	E	G	F	D	F	L	H	Y	D	V	K	T	G	D	F	I	L	H	F	K	M	N	R	N	L	S	F	Q	R	G	L	P	G	F	M	P	A	W	D	I	V	F	E	K	N	E	T
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	T	T						B		T	T	S			S										T								T	T	T		S							T	T	S		G	G	G	B		S				S		S
	.	.	.	.	.	.	.	.	.	1130	.	.	.	.	.	.	.	.	.	1140	.	.	.	.	.	.	.	.	.	1150	.	.	.	.	.	.	.	.	.	1160	.	.	.	.	.	.	.	.	.	1170	.	.	.	.	.	.	.	.	.	1180	.	.	.	.	.	.	.	.	.	1190
Sequence	Q	F	D	A	K	G	T	P	F	I	A	G	K	R	I	V	P	Y	R	D	L	Y	P	A	N	E	L	I	A	L	L	E	E	K	G	I	V	F	R	D	G	S	N	I	L	P	K	L	L	E	N	D	D	S	H	A	I	D	T	M	V	A	L	I	R	S	V	L	Q	M
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)				T	T						T	T																							T				T	T												T																T
	.	.	.	.	.	.	.	.	.	1200	.	.	.	.	.	.	.	.	.	1210	.	.	.	.	.	.	.	.	.	1220	.	.	.	.	.	.	.	.	.	1230	.	.	.	.	.	.	.	.	.	1240	.	.	.	.	.	.	.	.	.	1250	.	.	.	.	.	.	.	.	.	1260
Sequence	R	N	S	N	A	A	T	G	E	D	Y	I	N	S	P	V	R	D	L	N	G	V	C	F	D	S	R	F	Q	N	P	E	W	P	M	D	A	D	A	N	G	A	Y	H	I	A	L	K	G	Q	L	L	L	N	H	L	K	E	S	K	D	L	K	L	Q	N	G	I	S	N
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)					T	T	T	T					B		S	B			T	T	S				B	G	G	G			T	T	S		S	S																							S	S	S	S				S
	.	.	.	.	.	.	.	.	.	1270	.	.
Sequence	Q	D	W	L	A	Y	I	Q	E	L	R	N
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)