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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c5b3zB_

Fold library idPDB HeaderMoleculeTitle
c5b3zB_2.30PDB header: isomerase,sugar binding proteinChain: B: PDB Molecule: peptidyl-prolyl cis-trans isomerase nima-interacting 1,


Added to library: Thu Feb 9 18:24:00 2017
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence KLPPGWEKRMSRSSGRVYYFNHITNASQWERPSGKIEEGKLVIWINGDKGYNGLAEVGKKFEKDTGIKVT
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Known secondary structure (DSSP)


TT
TTT

TTT

SS
SSS
S
TTS

TTS



 .........80.........90.........100.........110.........120.........130.........140
Sequence VEHPDKLEEKFPQVAATGDGPDIIFWAHDRFGGYAQSGLLAEITPDKAFQDKLYPFTWDAVRYNGKLIAY
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Known secondary structure (DSSP)

TTTTT
S
SGGGTT
B





TB
TTT
S
 .........150.........160.........170.........180.........190.........200.........210
Sequence PIAVEALSLIYNKDLLPNPPKTWEEIPALDKELKAKGKSALMFNLQEPYFTWPLIAADGGYAFKYENGKY
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Known secondary structure (DSSP)

TTT
SS

SBGGGTTT



SSSGGGTTT
TT
 .........220.........230.........240.........250.........260.........270.........280
Sequence DIKDVGVDNAGAKAGLTFLVDLIKNKHMNADTDYSIAEAAFNKGETAMTINGPWAWSNIDTSKVNYGVTV
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Known secondary structure (DSSP) SSSTTSS
TT

TTS
GGGT


 .........290.........300.........310.........320.........330.........340.........350
Sequence LPTFKGQPSKPFVGVLSAGINAASPNKELAKEFLENYLLTDEGLEAVNKDKPLGAVALKSYEEELAKDPR
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Known secondary structure (DSSP)

TT


BTT
S
TTTSS


SBTTS
 .........360.........370.........380.........390.........400
Sequence IAATMENAQKGEIMPNIPQMSAFWYAVRTAVINAASGRQTVDEALKDAQT
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Known secondary structure (DSSP) TS



TTTSS
T


Download:PDB structure FASTA sequence

Hidden Markov model

View in Jmol



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Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Michael Sternberg 
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