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Protein Homology/analogY Recognition Engine V 2.2 |
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Fold library id | PDB Header | Molecule | Title |
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c5b0nA_ | 1.80 | PDB header: ligase | Chain: A: PDB Molecule: e3 ubiquitin-protein ligase ipah9.8; |
Added to library: Sat Apr 9 09:21:29 2016 | |
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Links to external resources | |
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  | 1 | . | . | . | . | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 |
Sequence | S | T | Y | A | D | Y | F | S | A | W | D | K | W | E | K | Q | A | L | P | G | E | E | R | D | E | A | V | S | R | L | K | E | C | L | I | N | N | S | D | E | L | R | L | D | R | L | N | L | S | S | L | P | D | N | L | P | A | Q | I | T | L | L | N | V | S | Y | N | Q | L | T |
Predicted secondary structure | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | |||||||||||||||||||||||||||||||||
SS confidence | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Known secondary structure (DSSP) | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | T | T | T | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | T | T | S | ![]() | ![]() | ![]() | T | T | S | S | S | T | T | S | ![]() | ![]() | ![]() | S | S | S |   | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 |
Sequence | N | L | P | E | L | P | V | T | L | K | K | L | Y | S | A | S | N | K | L | S | E | L | P | V | L | P | P | A | L | E | S | L | Q | V | Q | H | N | E | L | E | N | L | P | A | L | P | D | S | L | L | T | M | N | I | S | Y | N | E | I | V | S | L | P | S | L | P | Q | A | L | K |
Predicted secondary structure | ![]() | ![]() | ![]() | ![]() | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
SS confidence | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Known secondary structure (DSSP) | T | T | ![]() | ![]() | ![]() | S | S | S | T | T | ![]() | ![]() | ![]() | S | S | S | T | T | ![]() | ![]() | ![]() | S | S | T | T |   | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . | . | . | . | . | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . | . | . | . | . | . | . | 210 |
Sequence | N | L | R | A | T | R | N | F | L | T | E | L | P | A | F | V | V | R | E | Y | F | F | D | R | N | Q | I | S | H | I | P | E | S | I | L | N | L | R | N | E | C | S | I | H | I | S | D | N | P | L | S | S | H | A | L | P | A | L | Q | R | L | T | S | S | P | D | Y | H | G | P |
Predicted secondary structure | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | |||||||||||||||||||||||||||||||||||||||||||||||
SS confidence | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Known secondary structure (DSSP) | ![]() | ![]() | ![]() | S | S | ![]() | ![]() | ![]() | T | T | S | ![]() | ![]() | ![]() | ![]() | T | S | T | T | ![]() | ![]() | ![]() | S | S | T | T | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | S | T | T | S |   | . | . | . | . | . | . | . | . | |||||||||||||||||||||
Sequence | R | I | Y | F | S | M | S | D | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Predicted secondary structure | ![]() | ![]() | ![]() | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
SS confidence | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Known secondary structure (DSSP) | ![]() | ![]() | ![]() | S | S |
Download: | PDB structure | FASTA sequence |
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