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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c5b04F_

Fold library idPDB HeaderMoleculeTitle
c5b04F_2.99PDB header: translationChain: F: PDB Molecule: probable translation initiation factor eif-2b subunit


Added to library: Sat Feb 27 08:38:15 2016
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence LQSIPIEFQAVVFAGFGNSLYPLTGSDALPKALLPIGNKPMLHYPLYWLEAAGFTSAILICMEEAEAHIN
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Known secondary structure (DSSP)


S






SSSTTT
S
SSS
GGG
BSSSSBTTTT



TTT
 .........80.........90.........100.........110.........120.........130.........140
Sequence AWLRSGYEGHMRIHVEAPTILDDSKSSADALRAVSHLIKNDFVCLSCDSIVGLPPYTVLDKFRLDNPSAL
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Known secondary structure (DSSP) TT

S



SS

SS

TGGG

STT

S


S
 .........150.........160.........170.........180.........190.........200.........210
Sequence AVYSPVLKYEHIDAKQLIGIEEKTSRLLYAKSSADVGSDFTFRMSLLWKHPRVTLNTNLSDAHIFVFKHW
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Known secondary structure (DSSP)









B
TTTT

BSSSSTTT



TSS


SS
GG
 .........220.........230.........240.........250.........260.........270.........280
Sequence VIDLIREKESISSIRGDLIPYLVKCQYQKSFTVALIAKDGIICSRANNLPNYFELNKCIAKLTPEQRLVD
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Known secondary structure (DSSP) G




SGGGTSGGG
SSS


S









SSS
TTSTTT



S

S
 .........290.........300.........310.........320.........330.........340.........350
Sequence VTVSERALVGADCMVNEGTTIKDNSNIKKSIIGKNCVIGKGVVVSNSILMDNIVVEDGVRLESCIVASGA
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Known secondary structure (DSSP) SS
B
TT

SS
SS

SS
S
S

SS
S
S



TT
S

TT
 .........360.........370.........380...
Sequence QIGAKSKLRECEIGVDHRVEAGRIARGERLVDM
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Known secondary structure (DSSP)
SS
S

TT

S

BSS
B





Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Michael Sternberg 
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