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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c5azdA_

Fold library idPDB HeaderMoleculeTitle
c5azdA_2.80PDB header: transport proteinChain: A: PDB Molecule: bacteriorhodopsin;


Added to library: Sat Apr 30 08:44:34 2016
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence MLPELSFGEYWLVFNMLSLTIAGMLAAFVFFLLARSYVAPRYHIALYLSALIVFIAGYHYLRIFESWVGA
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Known secondary structure (DSSP)



B
GGGTS
GGG
 .........80.........90.........100.........110.........120.........130.........140
Sequence YQLQDGVYVPTGKPFNDFYRYADWLLTVPLLLLELILVLGLTAARTWNLSIKLVVASVLMLALGYVGEVN
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Known secondary structure (DSSP) TT
S



STT

S
 .........150.........160.........170.........180.........190.........200.........210
Sequence TEPGPRTLWGALSSIPFFYILYVLWVELGQAIREAKFGPRVLELLGATRLVLLMSWGFYPIAYALGTWLP
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Known secondary structure (DSSP)

TS


S
 .........220.........230.........240.........250
Sequence GGAAQEVAIQIGYSLADLIAPIYGLLVFAIARAKSLEEGF
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Known secondary structure (DSSP)



TT


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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