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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c5azaA_

Fold library idPDB HeaderMoleculeTitle
c5azaA_2.08PDB header: sugar binding protein, transferaseChain: A: PDB Molecule: maltose-binding periplasmic protein,oligosaccharyl


Added to library: Sat Jan 16 09:04:32 2016
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence KIEEGKLVIWINGDKGYNGLAEVGKKFEKDTGIKVTVEHPDKLEEKFPQVAATGDGPDIIFWAHDRFGGY
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Known secondary structure (DSSP)


TTS

TTS
S



TTTT
S
SGGG
 .........80.........90.........100.........110.........120.........130.........140
Sequence AQSGLLAEITPDKAFQDKLYPFTWDAVRYNGKLIAYPIAVEALSLIYNKDLLPNPPKTWEEIPALDKELK
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Known secondary structure (DSSP) TT
B





TTB
TTTTT
S

TTT
SS

SBGGG
 .........150.........160.........170.........180.........190.........200.........210
Sequence AKGKSALMFNLQEPYFTWPLIAADGGYAFKYENGKYDIKDVGVDNAGAKAGLTFLVDLIKNKHMNADTDY
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Known secondary structure (DSSP) TTT
BS




S
T
SS

S
SSS

TTTTSTTSS
TT

 .........220.........230.........240.........250.........260.........270.........280
Sequence SIAEAAFNKGETAMTINGPWAWSNIDTSKVNYGVTVLPTFKGQPSKPFVGVLSAGINAASPNKELAKEFL
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Known secondary structure (DSSP) TTSBS
GGGT




BBTTB



BTT
S
 .........290.........300.........310.........320.........330.........340.........350
Sequence ENYLLTDEGLEAVNKDKPLGAVALKSYEEELVKDPRIAATMENAQKGEIMPNIPQMSAFWYAVRTAVINA
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Known secondary structure (DSSP) TTSSS


SBTTSTS



TT
 .........360.........370.........380.........390.........400.........410.........420
Sequence ASGRQTVDEALKDAQTRIAAAKAEAAAKAEAAAKAAAAWEDALKWLRENTPEYSTATSWDRDHILALFLA
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Known secondary structure (DSSP) TSS
S
TT




 .........430.........440.........450.........460.........470.........480.........490
Sequence RDGNISEVDFESWELNYFLVYLNDWAKFNAISYLGGAITRREYNGDESGRGAVTTLLPLPRYGEKYVNLY
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Known secondary structure (DSSP)

TGGG


TTTTT

GGGGGGTTSS


TTS





TTTT
 .........500.........510.........520.........530.........540.........550.........560
Sequence AKVIVDVSNSSVKVTVGDRECDPLMVTFTPSGKTIKGTGTCSDGNAFPYVLHLTPTIGVLAYYKVATANF
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Known secondary structure (DSSP) TT
TTTS
TT
STTT



STTS
B


SSGGGTT
 .........570.........580.........590.........600.........610.........620.........630
Sequence IKLAFGVPASTIPGFSDKLFSNFEPVYESGNVIVYRFTPFGIYKIEENINGTWKQVYNLTPGKHELKLYI
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Known secondary structure (DSSP)




SSTTTT
STTS


S
 .........640.........650.........660.........670.........680.........690.........700
Sequence SAFGRDIENATLYIYAINNEKIIEKIKIAEISHMDYLNEYPIAVNVTLPNATSYRFVLVQKGPIGVLLDA
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Known secondary structure (DSSP)
SS
TTBTTB



S
S

S
 .........710.........720.........730.........740.........750.........760.........770
Sequence PKVNGEIRSPTNILREGESGEIELKVGVDKDYTADLYLRATFIYLVRKSGKDNEDYDAAFEPQMDVFFIT
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Known secondary structure (DSSP)
TT

SSB
S
SS
SS

SSSSTT
TT

 .........780.........790.........800.........810.........820.........830......
Sequence KIGENIQLKEGENTVKVRAELPEGVISSYKDELQRKYGDKLIIRGIRVEPVFIAEKEYLMLEVSAS
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Known secondary structure (DSSP)
S

TTGGG


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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