Standard Mode | Switch to Expert Mode | Login to view past jobsRetrieve Phyre Job Id
 
Subscribe to Phyre at Google Groups
Email:
Visit Phyre at Google Groups
 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c5awqA_

Fold library idPDB HeaderMoleculeTitle
c5awqA_PDB header: hydrolaseChain: A: PDB Molecule: isomaltodextranase;PDBTitle: arthrobacter globiformis t6 isomaltodextranse complexed with panose


Added to library: Sat Sep 12 08:21:55 2015
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence PVTAAPPLRLASRNSVFTRSGAGPRYWNIYGYSFPHNAPIPENEWKVNIDWLAGNFADFGYDIACTDGWI
Predicted secondary structure











































SS confidence





































































Known secondary structure (DSSP)








S



S

TTS


TGGGT



S

 .........80.........90.........100.........110.........120.........130.........140
Sequence EGSSRTTGNGYITSYNDSWQHDWAYWANYLAARKMKLGVYYNPLWVHRAAVEDASKTVLGRPDVKIADLV
Predicted secondary structure






















































SS confidence





































































Known secondary structure (DSSP) TT


B
TTS
B
SS
TT
SS
TT


TTT
TT
TTGGGGS
 .........150.........160.........170.........180.........190.........200.........210
Sequence VPGDFFARDIGGNQLYWLDVTKSGAKEYVQGYVRYFKDLGVPYLRIDFLSWYEDGRDANIGQVNAPHGRA
Predicted secondary structure














































SS confidence





































































Known secondary structure (DSSP)
TT
BTTGGGT

S

TTSTTT
S

STTT
S



 .........220.........230.........240.........250.........260.........270.........280
Sequence NYELALSWINEAAGEDMEVSLVPHMFQDGSAELANGDLVRINADADKGGWDRLSGMRQNWQDAWPNWANP
Predicted secondary structure



























SS confidence





































































Known secondary structure (DSSP) TTTS




S
SS

TT

S

S

SSSSSSSS
 .........290.........300.........310.........320.........330.........340.........350
Sequence FCGFTGWSHRNGRGQLILDGDFMRASTFASDEERKTMMNLMVAAGSPLAIADTYQQIGNNAWVYTNKEVL
Predicted secondary structure





































SS confidence





































































Known secondary structure (DSSP) GGGBSTTSB


B
GGGSSST




TTT
TT
GGGG

 .........360.........370.........380.........390.........400.........410.........420
Sequence QLNADGLVGKPLYRSATPFSKDPGSRDTERWAGQLPDGSWGVALFNRSDTETVTKTIDFAKDLGLATGGN
Predicted secondary structure










































SS confidence





































































Known secondary structure (DSSP) T




SS
TTT
GGG
TTS



SS








SS
 .........430.........440.........450.........460.........470.........480.........490
Sequence VRDLWEHRNLGMDSRATAALAPHASAIFRVTPPKMHGTTRYPAAFAAWGGGAGFNYNHPGYDGNGFVDGL
Predicted secondary structure















































SS confidence





































































Known secondary structure (DSSP) TTTTS
TT



GGGGGGSTT


STT
STT
 .........500.........510.........520.........530.........540.........550.........560
Sequence QAGSGSADPLVTFAVQVPHRGSYAIRYRYANATGDTSTMTVTAEKADRSTVDGPVHVSFPGLATWDTWGV
Predicted secondary structure







































SS confidence





































































Known secondary structure (DSSP) S

SSSS

SSS

SSS

TT




SSTT

 .........570.........580.........590.....
Sequence ADGTITLDAGLNLVTIGRGATDKGAINLNWIELDM
Predicted secondary structure










SS confidence


































Known secondary structure (DSSP)
S

TT

S


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


Phyre is now FREE for commercial users!

All images and data generated by Phyre2 are free to use in any publication with acknowledgement

Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
© Structural Bioinformatics Group, Imperial College, London
Michael Sternberg 
Disclaimer
Terms and Conditions
Structural Biology Group logo Imperial logo
BBSRC logo
Phyre2 is part of Genome3D