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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c5aorA_

Fold library idPDB HeaderMoleculeTitle
c5aorA_PDB header: hydrolase/rnaChain: A: PDB Molecule: dosage compensation regulator;PDBTitle: structure of mle rna adp alf4 complex


Added to library: Sat Nov 21 08:50:53 2015
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence LGEAYRPLEQRDMNEAEAFDVNAAIHGNWTIENAKERLNIYKQTNNIRDDYKYTPVGPEHARSFLAELSI
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Known secondary structure (DSSP)

TTT






S
GGGTTT

TT




S
GGG
 .........80.........90.........100.........110.........120.........130.........140
Sequence YVPALNRTVTARESGSNKKSASKSCALSLVRQLFHLNVIEPFSGTLKKDEQLKPYPVKLSPNLINKIDEV
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Known secondary structure (DSSP) GGGTSSTTSS



S










B

 .........150.........160.........170.........180.........190.........200.........210
Sequence IKGLDLPVVNPRNIKIELDGPPIPLIVNLSRIESSVIPWAPPQANWNTWHACNIDEGELATTSIDDLSMD
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Known secondary structure (DSSP) TT




GGG



SSS




















TTTTTT

SSSSSS

 .........220.........230.........240.........250.........260.........270.........280
Sequence YERSLRDRRQNDNEYRQFLEFREKLPIAAMRSEILTAINDNPVVIIRGNTGCGKTTQIAQYILDDYICSG
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Known secondary structure (DSSP)
TSGGGGG
S
TTSSTT
 .........290.........300.........310.........320.........330.........340.........350
Sequence QGGYANIYVTQPRRISAISVAERVARERCEQLGDTVGYSVRFESVFPRPYGAILFCTVGVLLRKLEAGLR
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Known secondary structure (DSSP)
GGG
SSTT

TTSSTT


SSSGGG

T
 .........360.........370.........380.........390.........400.........410.........420
Sequence GVSHIIVDEIHERDVNSDFLLVILRDMVDTYPDLHVILMSATIDTTKFSKYFGICPVLEVPGRAFPVQQF
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Known secondary structure (DSSP) T

SGGG


TT
SS

TTS




SS
 .........430.........440.........450.........460.........470.........480.........490
Sequence FLEDIIQMTDFVPSAESRRKRKEVEDEEQLLSEDKDEAEINYNKVCEDKYSQKTRNAMAMLSESDVSFEL
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Known secondary structure (DSSP)
T








GGG

GGG


TTS
S
SSS

 .........500.........510.........520.........530.........540.........550.........560
Sequence LEALLMHIKSKNIPGAILVFLPGWNLIFALMKFLQNTNIFGDTSQYQILPCHSQIPRDEQRKVFEPVPEG
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Known secondary structure (DSSP) TT



SSTSTTTT
TTT
TTS
TTTS


TT
 .........570.........580.........590.........600.........610.........620.........630
Sequence VTKIILSTNIAETSITIDDIVFVIDICKARMKLFTSHNNLTSYATVWASKTNLEQRKGRAGRVRPGFCFT
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Known secondary structure (DSSP)

GGGSSS


TT

GGGT

TTSSSSS
 .........640.........650.........660.........670.........680.........690.........700
Sequence LCSRARFQALEDNLTPEMFRTPLHEMALTIKLLRLGSIHHFLSKALEPPPVDAVIEAEVLLREMRCLDAN
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Known secondary structure (DSSP)
S
S
SS


GGGGS

TT


TSSS


TTSB
TT
 .........710.........720.........730.........740.........750.........760.........770
Sequence DELTPLGRLLARLPIEPRLGKMMVLGAVFGCADLMAIMASYSSTFSEVFSLDIGQRRLANHQKALSGTKC
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Known secondary structure (DSSP) S
B
TSSS
TT
TT



SB


TT

S

GGGTTS
 .........780.........790.........800.........810.........820.........830.........840
Sequence SDHVAMIVASQMWRREKQRGEHMEARFCDWKGLQMSTMNVIWDAKQQLLDLLQQAGFPEECMISHEVDER
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Known secondary structure (DSSP) BT
TB
TT

GGGG





TT
 .........850.........860.........870.........880.........890.........900.........910
Sequence IDGDDPVLDVSLALLCLGLYPNICVHKEKRKVLTTESKAALLHKTSVNCSNLAVTFPYPFFVFGEKIRTR
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Known secondary structure (DSSP)

S

TTT
TTGGG
TTSTT

SS



SS
SS
 .........920.........930.........940.........950.........960.........970.........980
Sequence AVSCKQLSMVSPLQVILFGSRKIDLAANNIVRVDNWLNFDIEPELAAKIGALKPALEDLITVACDNPSDI
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Known secondary structure (DSSP) S
S
S

GGG
TTTS

GGGT
 .........990.........1000.........
Sequence LRLEEPYAQLVKVVKDLCVKSAGDFGLQR
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Known secondary structure (DSSP) TS

STTTTBTT



Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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