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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c5ao4D_

Fold library idPDB HeaderMoleculeTitle
c5ao4D_PDB header: hydrolaseChain: D: PDB Molecule: deoxynucleoside triphosphate triphosphohydrolase samhd1;PDBTitle: crystal structure of in vitro phosphorylated human samhd12 (amino acid residues 115-626) bound to gtp


Added to library: Sat Oct 17 08:34:14 2015
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence VINDPIHGHIELHPLLVRIIDTPQFQRLRYIKQLGGGYYVFPGASHNRFEHSLGVGYLAGCLVHALGEKQ
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Known secondary structure (DSSP)
TTT


SSTTTGGGGGSBSSGGGGGT
TT


B
 .........80.........90.........100.........110.........120.........130.........140
Sequence PELQISERDVLCVQIAGLCHDLGHGPFSHMFDGRFIPLARPEVKWTHEQGSVMMFEHLINSNGIKPVMEQ
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Known secondary structure (DSSP) GGG


TTTT

TTTTSTTS


T
 .........150.........160.........170.........180.........190.........200.........210
Sequence YGLIPEEDICFIKEQIVPYKGRPENKSFLYEIVSNIDVDKWDYFARDCHHLGIQNNFDYKRFIKFARVCE
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Known secondary structure (DSSP) TT




SSS
GGGGGGGGTT



T





T
 .........220.........230.........240.........250.........260.........270.........280
Sequence VDNELRICARDKEVGNLYDMFHTRNSLHRRAYQHKVGNIIDTMITDAFLKADDYIEITGAGGKKYRISTA
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Known secondary structure (DSSP)
SSSSGGGTTT
TTTT


GGG

TTGG
 .........290.........300.........310.........320.........330.........340.........350
Sequence IDDMEAYTKLTDNIFLEILYSTDPKLKDAREILKQIEYRNLFKYVGETESLPKEVASAKVDVINMVSFYC
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Known secondary structure (DSSP) GT
TT
STS


GGGTT








T








 .........360.........370.........380....
Sequence KTAPNRALIRVYKSLYAARQYFVQWCADRNFTKP
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Known secondary structure (DSSP) SSSTT




TT




Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Michael Sternberg 
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