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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c5ancA_

Fold library idPDB HeaderMoleculeTitle
c5ancA_PDB header: translationChain: A: PDB Molecule: 60s ribosomal protein l3;PDBTitle: mechanism of eif6 release from the nascent 60s ribosomal2 subunit


Added to library: Sat Oct 24 14:01:10 2015
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence MSHRKFEAPRHGNLGFRPRKRAARHQGKVKSFPKDDRTQKVHLTAFMGYKAGMTHVVRDLEKPGSKMHKK
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Known secondary structure (DSSP)


S
S



SS
GGGTT

B
S
SB










S




S




TTSSSSS
 .........80.........90.........100.........110.........120.........130.........140
Sequence EIVEAVTIIECPPMYIVGLVGYVETAQGLKTYKTVWAQHLSDNFRRRLYKNWYKSKSKKAFTKYVKQYET
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Known secondary structure (DSSP)







SS



S



S

SSGGGS
S

SSSS

SS
S

TTS


S
 .........150.........160.........170.........180.........190.........200.........210
Sequence EEGKKSIEASLQAIKKRCSVVRVIAHTQVHKLKLTQKKAHVLEIQVNGGSIVEKVNFAVANFEKTVNVTG
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Known secondary structure (DSSP) S
S



TTTTS


S



SS
TS
GGG
 .........220.........230.........240.........250.........260.........270.........280
Sequence VFAENELIDVIGVTKGKGFNGVIKRWGVRKLPRKTHKGLRKVACIGAWHPSRVSTTVPRAGQLGYHHRVE
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Known secondary structure (DSSP) TS
SS







SS



S
SSS

SS

S
SS
STTSS

SSS




B
 .........290.........300.........310.........320.........330.........340.........350
Sequence RNKKIYRIGQAQPEDGKQISTGKTEFDLTEKTINPMGGFAHYGMVKHEFLMLKGCVAGPRKRALTLRKSI
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Known secondary structure (DSSP)



B



SSSSTT
SS
STTTT
S



S

S

SS




S
S

SS
TT


B
S
 .........360.........370.........380.........390........
Sequence TTQTGRAALEKITLKFIDTSSKFGHGLHQTAEDKTKYFGVKKSRSTKA
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Known secondary structure (DSSP) S


TTTTS






B



SSS

S
TTT






Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Michael Sternberg 
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