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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c5an8B_

Fold library idPDB HeaderMoleculeTitle
c5an8B_PDB header: transport proteinChain: B: PDB Molecule: trpv2;PDBTitle: electron cryo-microscopy of a trpv2 channel


Added to library: Sat Dec 26 08:53:15 2015
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence DRLFNVVARGNPEDLAGLLEYLRRTSKYLTDSEYTEGSTGKTCLMKAVLNLQDGVNACIQPLLEIDRDSG
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Known secondary structure (DSSP)
TTT
S
TTSS


SS

TTTT
GGGS
TTT
 .........80.........90.........100.........110.........120.........130.........140
Sequence NPQPLVNAQCTDEYYRGHSALHIAIEKRSLQCVKLLVENGANVHAKACCFYFGELPLSLAACTKQWDVVN
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Known secondary structure (DSSP)
SS
GGG



TTTSTT

T
TT

S









SST
 .........150.........160.........170.........180.........190.........200.........210
Sequence YLLENPHPAASLQAQDSLGNTVLHALVMIADNSPENSALVVRMYDGLLQAGARLCPNVQLEGIPNLEGLT
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Known secondary structure (DSSP) SSSS


TT


TT




S
S
SS
SS



SS


 .........220.........230.........240.........250.........260.........270.........280
Sequence PLKLAAKEGKIEIFKHILQREFSAPCQSLSRKFTEWCYGPVRVSLYDLASVDSWEENSVLEIIAFHSRSP
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Known secondary structure (DSSP) TT

S



TTTGGGB


S
SS




STT
SSSSS
TT


S
 .........290.........300.........310.........320.........330.........340.........350
Sequence HRHRMVVLEPLNKLLQAKWDRLIPRFCFNFLCYLVYMLIFTAVAYHQPALAGNSMLLLGHILILLGGVYL
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Known secondary structure (DSSP)

TTGGGST




 .........360.........370.........380.........390.........400.........410.........420
Sequence LLGQLWYFWRRRLFIWISFMDSYFEILFLLQALLTVLSQVLCFLAIEWYLPLLVSSLVLGWLNLLYYTRG
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Known secondary structure (DSSP) TTT



TTT
SS
GGG
 .........430.........440.........450.........460.........470.........480.........490
Sequence FQHTGIYSVMIQKVILRDLLRFLLVYLVFLFGFAVALVSLSREPPYRSILDASLELFKFTIGMGELAFQE
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Known secondary structure (DSSP)
STT





TTTTT






G
 .........500.........510.........520.........530.........540.........550.........560
Sequence QLRFRGVVLLLLLAYVLLTYVLLLNMLIALMSETVNSVATDSWSIWKLQKAISVLEMENGYWWCRRKKQR
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Known secondary structure (DSSP) GGSSS

TTS

TTSTT



 .........570.........580......
Sequence AGVMLTVGTRPDGSPDERWCFRVGEM
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Known secondary structure (DSSP)









SS








Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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