Fold library entry viewer: c5akpA_

Added to library: Sat May 7 08:44:41 2016
Links to external resources

	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	V	C	A	R	E	P	I	H	I	P	G	L	I	Q	P	Y	G	V	L	L	V	I	D	P	A	D	G	R	I	V	Q	A	S	T	T	A	A	D	L	L	G	V	P	M	A	A	L	L	G	M	P	Y	T	Q	V	L	T	L	P	E	A	Q	P	F	A	V	D	D	Q	P
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)		G	G	G				S			S				T	T	S							T	T	T	T						B	T	T					S	S	S						T	T	S	B						B		S	S							S	S	S
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	Q	H	L	M	H	A	E	V	R	F	P	Q	R	A	T	P	P	A	S	A	W	V	A	A	W	H	L	Y	P	Q	Q	W	L	V	E	M	E	P	R	D	A	R	V	T	L	R	E	A	M	P	L	L	R	S	V	E	R	D	P	G	I	A	E	A	A	V	R	V	A	K
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)									B		T	T	S	S	S			S	S										S	S																										T	T		S	S
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	G	L	R	S	L	I	G	F	D	R	V	M	I	Y	R	F	D	E	E	W	N	G	D	I	I	A	E	A	R	K	P	E	L	E	A	Y	L	G	L	H	Y	P	A	S	D	I	P	A	Q	A	R	A	L	Y	L	R	N	R	V	R	Q	I	A	D	V	G	Y	Q	P	S
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)						T			S									T	T	S											S	S	S				T	T					G	G	G	S											S	S					S	S	T	T
	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280
Sequence	P	I	Q	P	T	V	H	P	Q	L	G	T	P	V	D	L	S	D	V	S	L	R	S	V	S	P	V	H	L	E	Y	L	A	N	M	G	V	T	A	T	L	V	A	S	I	V	V	N	D	A	L	W	G	L	I	S	C	H	H	Y	S	P	H	F	T	N	H	A	M	R
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)		B	S	S		B		T	T	T			B				S	S		T	T	B														T												T	T											S	S
	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350
Sequence	D	V	T	D	A	V	A	R	T	L	A	G	R	I	G	A	L	Q	A	V	A	R	A	R	L	E	S	V	L	L	T	V	R	E	K	L	I	T	D	F	N	D	A	E	H	M	T	V	E	L	L	D	D	M	A	P	D	L	M	D	V	V	D	A	D	G	V	A	I	F
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)																																												S	S																T	T	T		S
	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420
Sequence	H	G	N	D	I	S	R	H	G	T	T	P	D	V	A	A	L	R	R	I	R	D	H	I	E	S	E	H	H	E	A	L	R	E	D	A	V	G	A	L	H	V	D	A	I	G	E	V	F	P	E	L	A	D	L	A	P	L	A	A	G	F	I	F	V	P	L	M	P	Q
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)		T	T							S															S	S	S	T	T							S		S	S				S							S	T	T		S	S					S								S	T	T
	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490
Sequence	S	R	S	A	L	L	W	T	R	R	E	Q	I	Q	Q	I	K	W	A	G	N	F	D	L	W	Q	Q	T	V	R	G	R	A	R	R	W	S	P	L	H	L	E	S	A	R	S	L	R	V	L	I	E	L	M	E	R	K	R	F	Q	Q	D	F	T	L	L	E	A	S	L
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)		S																	S												S															T	T
	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560
Sequence	S	R	L	R	D	G	V	A	I	I	E	R	G	T	A	N	A	A	H	R	L	L	F	V	N	T	A	F	A	D	V	C	G	S	D	V	A	E	L	I	G	R	E	L	Q	T	S	D	A	P	R	A	N	V	E	L	L	Q	D	A	L	R	N	G	R	A	A	Y	V	T
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)		T		S	S										S	S	S																S	S						T	T		B	S					S															T
	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.
Sequence	L	P	L	Q	V	S	A	P	V	Y	R	Q	F	H	L	E	P	L	P	S	P	S	G	V	T	A	H	W	L	L	Q	L	R
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)																					S	S	S	S

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PDB structure

FASTA sequence

Hidden Markov model

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