Fold library entry viewer: c5ak1A_

Added to library: Sat Mar 12 08:50:06 2016
Links to external resources

	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	A	S	P	Q	R	G	R	P	R	L	N	A	A	R	T	T	F	V	G	D	N	G	Q	P	L	R	G	P	Y	T	S	T	E	W	T	A	A	A	P	Y	D	Q	I	A	R	V	K	E	L	G	F	N	A	V	H	L	Y	A	E	C	F	D	P	R	Y	P	A	P	G	S
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)												T	T	S	S	S				T	T	S		B									S	S	S										G	G	G	G	G	T													T	T	T	T	S	T	T
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	K	A	P	G	Y	A	V	N	E	I	D	K	I	V	E	R	T	R	E	L	G	L	Y	L	V	I	T	I	G	N	G	A	N	N	G	N	H	N	A	Q	W	A	R	D	F	W	K	F	Y	A	P	R	Y	A	K	E	T	H	V	L	Y	E	I	H	N	E	P	V	A	W
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)			T	T	T	T														T	T										T	T		T	T																			T	T		T	T							S			S	S	S
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	G	P	P	Y	S	S	S	T	A	N	P	P	G	A	V	D	X	E	I	D	V	Y	R	I	I	R	T	Y	A	P	E	T	P	V	L	L	F	S	Y	A	V	F	G	G	K	G	G	A	A	E	A	L	K	D	I	R	A	F	N	K	A	V	F	G	N	E	N	A	V	W
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)		S		T	T	S	T	T	S	S	S	S																		T	T									S																							T	S	S	S	S
	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280
Sequence	T	N	E	A	V	A	F	H	G	Y	A	G	W	Q	E	T	T	I	A	V	E	E	L	L	K	A	G	Y	P	C	F	X	T	E	Y	A	G	G	A	W	G	S	G	X	G	G	L	D	V	E	L	T	Y	E	L	E	R	L	G	V	S	W	L	T	F	Q	Y	I	P	P
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	S	S								T	T															T	T												S	T	T	T	S	S		S													T						S	B		-
	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350
Sequence	T	G	V	S	D	D	V	T	K	P	E	Y	F	S	A	L	V	E	N	S	G	L	S	W	T	P	D	Y	G	N	W	P	A	A	R	G	V	Y	G	N	G	G	L	A	R	E	T	A	T	W	I	N	N	F	L	T	G	T	T	R	I	E	A	E	D	F	D	W	G	G
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)			S	S	B		T	T	S	G	G	G	T														S	S	S	S		S				B		S	S	G	G	G	S									T	T										G	G	G			B	S
	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420
Sequence	N	G	V	S	Y	Y	D	T	D	S	V	N	V	G	G	Q	Y	R	P	D	E	G	V	D	I	E	K	T	S	D	T	G	G	G	Y	N	V	G	W	I	S	E	G	E	W	L	E	Y	T	I	R	V	R	N	P	G	Y	Y	N	L	S	L	R	V	A	G	I	S	G	S
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	B	T	T	T				S		S	S		S	S		S	S		T	T	S	S	S							S	T	T		S								T	T										S	S													S	S
	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490
Sequence	R	V	Q	V	S	F	G	N	Q	D	K	T	G	V	W	E	L	P	A	T	G	G	F	Q	T	W	T	T	A	T	R	Q	V	F	L	G	A	G	L	Q	K	L	R	I	N	A	L	S	G	G	F	N	L	N	W	I	E	L	S	P	I	S	T	G	T	I	P	D	G	T
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)							T	T			S	S		S							S	S	T	T													S										S	S		S												S	S		S	S		S
	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560
Sequence	Y	K	F	L	N	R	A	N	G	K	T	L	Q	E	V	T	G	N	N	S	I	I	T	A	D	Y	K	G	I	T	E	Q	H	W	K	I	Q	H	I	G	G	G	Q	Y	R	I	S	S	A	G	R	G	W	N	W	N	W	W	X	G	F	G	T	V	G	W	W	G	T	G
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)						T	T	T								G	G	G	T									S		G	G	G									T	T							S	S	S							S	S	S					S	S	S		S	S
	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630
Sequence	S	S	T	C	F	I	I	S	P	T	G	D	G	Y	Y	R	I	V	L	V	G	D	G	T	N	L	Q	I	S	S	G	D	P	S	K	I	E	G	K	A	F	H	G	G	A	N	Q	Q	W	A	I	L	P	V	S	A	P	A	F	P	T	G	L	S	A	V	L	D	S	S
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	S	S	S								S	S	S							T	T	T								T	T												S		G	G	G							T	T	S														T
	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.	.	.	.	690	.	.	.	.	.	.	.	.	.	700
Sequence	G	N	T	A	N	L	T	W	N	A	A	P	G	A	N	S	Y	N	V	K	R	S	T	K	S	G	G	P	Y	T	T	I	A	T	N	I	T	S	T	N	Y	T	D	T	G	V	A	T	G	T	K	Y	Y	Y	V	V	S	A	V	S	N	G	V	E	T	L	N	S	A	E
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	T											T	T		S								S	S	T	T												S	S									T	T												T	T
	.	.	.	.	.	.	.	.	.	710	.	.	.	.	.	.	.	.	.	720	.	.	.	.	.	.	.	.	.	730	.	.	.	.	.	.	.	.	.	740	.	.	.	.	.	.	.	.	.	750	.	.	.	.	.	.	.	.	.	760	.	.	.	.	.	.	.	.	.	770
Sequence	A	I	L	Q	Y	P	K	L	T	G	T	V	I	G	T	Q	G	S	W	N	N	I	G	N	T	I	H	K	A	F	D	G	D	L	N	T	F	F	D	G	P	T	A	N	G	C	W	L	G	L	D	F	G	E	G	V	R	N	V	I	T	Q	I	K	F	C	P	R	S	G
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)				B			B									S			S	T	T	S	S			T	T	T	T	S	S	S		S	S			B			S	S	S	S										T	T													B	T	T
	.	.	.	.	.	.	.	.	.	780	.	.	.	.	.	.	.	.	.	790	.	.	.	.	.	.	.	.	.	800	.	.	.	.	.	.	.	.	.	810	.	.	.	.	.	.	.	.	.	820	.	.	.	.	.	.	.	.	.	830	.	.	.	.	.	.	.	.	.	840
Sequence	Y	E	Q	R	X	I	G	G	I	F	Q	G	A	N	K	E	D	F	S	D	A	V	T	L	F	T	I	T	S	L	P	G	S	G	T	L	T	S	V	D	V	D	N	P	T	G	F	R	Y	V	R	Y	L	S	P	D	G	S	N	G	N	I	A	E	L	Q	F	F	G	T
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	B		T	T	S	T	T						B	S	S	T	T		S	S	B								S				S	S	S													S	B							T	T	S	T	T								B
	.	.	.
Sequence	P	A	G
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	S

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PDB structure

FASTA sequence

Hidden Markov model

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