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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c5ak1A_

Fold library idPDB HeaderMoleculeTitle
c5ak1A_2.64PDB header: hydrolaseChain: A: PDB Molecule: carbohydrate binding family 6;


Added to library: Sat Mar 12 08:50:06 2016
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence ASPQRGRPRLNAARTTFVGDNGQPLRGPYTSTEWTAAAPYDQIARVKELGFNAVHLYAECFDPRYPAPGS
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Known secondary structure (DSSP)








TTSSS
TTS
B


SSS



GGGGGT



TTTTSTT
 .........80.........90.........100.........110.........120.........130.........140
Sequence KAPGYAVNEIDKIVERTRELGLYLVITIGNGANNGNHNAQWARDFWKFYAPRYAKETHVLYEIHNEPVAW
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Known secondary structure (DSSP)

TTTTTT

TT
TT


TT
TT

S

SSS
 .........150.........160.........170.........180.........190.........200.........210
Sequence GPPYSSSTANPPGAVDXEIDVYRIIRTYAPETPVLLFSYAVFGGKGGAAEALKDIRAFNKAVFGNENAVW
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Known secondary structure (DSSP)
S
TTSTTSSSS

TT

S


TSSSS


 .........220.........230.........240.........250.........260.........270.........280
Sequence TNEAVAFHGYAGWQETTIAVEELLKAGYPCFXTEYAGGAWGSGXGGLDVELTYELERLGVSWLTFQYIPP
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Known secondary structure (DSSP) SS
TT
TT





STTTSS
S

T


SB
-

 .........290.........300.........310.........320.........330.........340.........350
Sequence TGVSDDVTKPEYFSALVENSGLSWTPDYGNWPAARGVYGNGGLARETATWINNFLTGTTRIEAEDFDWGG
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Known secondary structure (DSSP)

SSB
TTSGGGT





SSSS
S


B
SSGGGS


TT

GGG

BS
 .........360.........370.........380.........390.........400.........410.........420
Sequence NGVSYYDTDSVNVGGQYRPDEGVDIEKTSDTGGGYNVGWISEGEWLEYTIRVRNPGYYNLSLRVAGISGS
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Known secondary structure (DSSP) BTTT
S
SS
SS
SS
TTSSS


STT
S



TT
SS

SS
 .........430.........440.........450.........460.........470.........480.........490
Sequence RVQVSFGNQDKTGVWELPATGGFQTWTTATRQVFLGAGLQKLRINALSGGFNLNWIELSPISTGTIPDGT
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Known secondary structure (DSSP) TTSS
S


SSTT


SSS
S

SS
SS
S
 .........500.........510.........520.........530.........540.........550.........560
Sequence YKFLNRANGKTLQEVTGNNSIITADYKGITEQHWKIQHIGGGQYRISSAGRGWNWNWWXGFGTVGWWGTG
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Known secondary structure (DSSP) TTT




GGGT





S
GGG
TTSSS

SSSSSS
SS
 .........570.........580.........590.........600.........610.........620.........630
Sequence SSTCFIISPTGDGYYRIVLVGDGTNLQISSGDPSKIEGKAFHGGANQQWAILPVSAPAFPTGLSAVLDSS
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Known secondary structure (DSSP) SSS

SSS
TTT

TT


S
GGG

TTS



T
 .........640.........650.........660.........670.........680.........690.........700
Sequence GNTANLTWNAAPGANSYNVKRSTKSGGPYTTIATNITSTNYTDTGVATGTKYYYVVSAVSNGVETLNSAE
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Known secondary structure (DSSP) T

TT
SSSTT



SS



TT


TT





 .........710.........720.........730.........740.........750.........760.........770
Sequence AILQYPKLTGTVIGTQGSWNNIGNTIHKAFDGDLNTFFDGPTANGCWLGLDFGEGVRNVITQIKFCPRSG
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Known secondary structure (DSSP)
B

B





S

STTSS

TTTTSSS
SS

B

SSSS






TT







BTT
 .........780.........790.........800.........810.........820.........830.........840
Sequence YEQRXIGGIFQGANKEDFSDAVTLFTITSLPGSGTLTSVDVDNPTGFRYVRYLSPDGSNGNIAELQFFGT
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Known secondary structure (DSSP) B
TTSTT


BSSTT
SSB






S


SSS









SB



TTSTT

B

 ...
Sequence PAG
Predicted secondary structure


SS confidence


Known secondary structure (DSSP) S


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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