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| Protein Homology/analogY Recognition Engine V 2.2 | |||||||
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| Fold library id | PDB Header | Molecule | Title |
|---|---|---|---|
| c5aj3p_ | PDB header: ribosome | Chain: P: PDB Molecule: mitoribosomal protein bs16m, mrps16; | PDBTitle: structure of the small subunit of the mammalian mitoribosome |
| Added to library: Sat Apr 25 08:17:58 2015 | |
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| Links to external resources | |
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|   | 1 | . | . | . | . | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 |
| Sequence | Y | K | D | E | P | W | K | Y | L | D | S | E | E | Y | Q | N | R | Y | G | S | R | P | V | W | A | D | Y | R | R | N | H | K | G | G | I | P | P | Q | R | T | R | K | M | C | I | R | G | N | K | V | A | G | N | P | C | P | I | C | R | D | Q | K | L | H | V | D | F | R | N | V |
| Predicted secondary structure | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ||||||||||||||||||||||||||||||||||||||||||||||||||
| SS confidence | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Known secondary structure (DSSP) | S | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | T | T | T | S | T | T | S | S | S | S | S | S | S | S | S | S | ![]() | ![]() | T | T | ![]() | ![]() | S | S | ![]() | ![]() | ![]() | ![]() | S | T | T | S | S | ![]() |   | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 |
| Sequence | K | L | L | E | Q | F | V | C | A | H | T | G | I | I | F | H | A | P | Y | T | G | V | C | M | K | Q | H | K | K | L | T | Q | A | I | Q | K | A | R | D | H | G | L | L | R | Y | H | I | P | Q | V | E | P | R | D | L | D | F | S | T | T | H | G | A | V | S | S | T | P | P | A |
| Predicted secondary structure | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ||||||||||||||||||||||||||||||||||||||||||
| SS confidence | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Known secondary structure (DSSP) | ![]() | ![]() | ![]() | ![]() | T | T | B | T | T | T | B | ![]() | ![]() | ![]() | ![]() | T | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | T | T | S | S | S | S | S | T | T | S | T | T | T | S |   | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . | . | . | . | . | . |
| Sequence | P | T | L | V | S | G | D | P | W | Y | P | W | Y | S | W | K | Q | P | P | E | R | E | L | S | R | L | R | R | L | Y | Q | G | R | L | R | E | E | S | G | P | P | P | E | L | M | P | E | V | ||||||||||||||||||||||
| Predicted secondary structure | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| SS confidence | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Known secondary structure (DSSP) | ![]() | ![]() | ![]() | ![]() | ![]() | T | S | S | T | T | T | S | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | S | T | T | T | S |
| Download: | PDB structure | FASTA sequence |
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