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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c5aj3k_

Fold library idPDB HeaderMoleculeTitle
c5aj3k_PDB header: ribosomeChain: K: PDB Molecule: mitoribosomal protein us11m, mrps11;PDBTitle: structure of the small subunit of the mammalian mitoribosome


Added to library: Sat Apr 25 08:17:26 2015
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence RRKALPPRTEKMAVDQDWPSVYPVAAPFKPSAVPLPVRMGYPVKRGVPMAKEGNLELLKIPNFLHLTPVA
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Known secondary structure (DSSP)






GGGT

TT



S




SSS

S



S


TT




STT
SS


GGG
 .........80.........90.........100.........110.........120.........130.........140
Sequence IKRHCEALKDFCTEWPAALDSDEKCEKHFPIEIDTADYVSAGPSIRNPKARVVTLRVKLSSLNLDDHAKK
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Known secondary structure (DSSP) TTT




SGGGS







SS



GGGG
GGGS


 .........150.........160.........170.........180.........190.........200.........210
Sequence KLIKLVGDRYCKSTDVLTIKTDRCPLKRQNYDYAVYLLTVLYHESWKTEEWEKKKTEADMEEYIWENSTS
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Known secondary structure (DSSP) GGGB
TTT

SSSST


T

TTS
SS

STT
 .........220.........230.........240.........250.........260.........270.....
Sequence EKNILETLLQIKAAEKNLELSKEELLGTKEVEDYRKSVVSLKNEGDNENTLSQYKESVKRLLNLA
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Known secondary structure (DSSP) T




ST
S
T


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Michael Sternberg 
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