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Protein Homology/analogY Recognition Engine V 2.2 |
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Fold library id | PDB Header | Molecule | Title |
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c5afuV_ | PDB header: motor protein | Chain: V: PDB Molecule: dynactin; | PDBTitle: cryo-em structure of dynein tail-dynactin-bicd2n complex |
Added to library: Sat Mar 14 08:36:08 2015 | |
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Links to external resources | |
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  | 1 | . | . | . | . | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 |
Sequence | S | G | N | K | V | S | R | Q | S | V | L | C | G | S | Q | N | I | V | L | N | G | K | T | I | I | M | N | D | C | I | I | R | G | D | L | A | N | V | R | V | G | R | H | C | V | V | K | S | R | S | V | I | R | P | P | F | K | K | F | S | K | G | V | A | F | F | P | L | H | I |
Predicted secondary structure | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | |||||||||||||||||||||||||||||||||||||||||||
SS confidence | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Known secondary structure (DSSP) | ![]() | ![]() | S | S | B | T | T | T | ![]() | ![]() | ![]() | T | T | ![]() | ![]() | T | T | ![]() | ![]() | S | S | S | ![]() | ![]() | ![]() | T | T | ![]() | ![]() | T | T | ![]() | ![]() | B | S | S | S | S | ![]() | ![]() |   | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 |
Sequence | G | D | H | V | F | I | E | E | D | C | V | V | N | A | A | Q | I | G | S | Y | V | H | V | G | K | N | C | V | I | G | R | R | C | V | L | K | D | C | C | K | I | L | D | N | T | V | L | P | P | E | T | V | V | P | P | F | T | V | F | S | G | C | P | G | L | F | S | G | E | L |
Predicted secondary structure | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ||||||||||||||||||||||||||||||||||
SS confidence | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Known secondary structure (DSSP) | T | T | ![]() | ![]() | T | T | B | B | S | ![]() | ![]() | ![]() | T | T | ![]() | ![]() | T | T | B | T | T | ![]() | ![]() | ![]() | T | T | ![]() | ![]() | T | T | T | T | S | S | ![]() | ![]() | ![]() | T | T | T | T | ![]() | ![]() | ![]() | ![]() |   | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . |
Sequence | P | E | C | T | Q | E | L | M | I | D | V | T | K | S | Y | Y | Q | K | F | L | P | L | T | Q | V | |||||||||||||||||||||||||||||||||||||||||||||
Predicted secondary structure | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | |||||||||||||||||||||||||||||||||||||||||||||||||||||
SS confidence | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Known secondary structure (DSSP) | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | T | T | S | S |
Download: | PDB structure | FASTA sequence |
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