Standard Mode | Switch to Expert Mode | Login to view past jobsRetrieve Phyre Job Id
 
Subscribe to Phyre at Google Groups
Email:
Visit Phyre at Google Groups
 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c5afdA_

Fold library idPDB HeaderMoleculeTitle
c5afdA_1.65PDB header: lyaseChain: A: PDB Molecule: n-acetylneuraminate lyase;


Added to library: Sat Mar 5 08:26:17 2016
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence MKKLTGLIAAPHTPFDSSSNVNFEEIDKIAKHLINDGVKGIYVCGTTGEGIHCSVEERKAIAERWVSACN
Predicted secondary structure






























SS confidence





































































Known secondary structure (DSSP)









B
TTS
B
TT

TSTTTTGGGS
T
 .........80.........90.........100.........110.........120.........130.........140
Sequence HKLDIIVHTGALSIVDTLELTRHADTLDILATSAIGPCFFKPGSVSDLVEYCATIAAAAPSKGFYYYHSG
Predicted secondary structure




























SS confidence





































































Known secondary structure (DSSP) TSS


SSTSS
S

SSS


STTSTTS
S
 .........150.........160.........170.........180.........190.........200.........210
Sequence MSGVNLNMEEFLIQADKRIPNLSGLKFNSGDLYEYQRCLRACDGKFDVPFGVDEFLPGALAVGAKSAVGS
Predicted secondary structure

























SS confidence





































































Known secondary structure (DSSP) TT





TT
SS
TSB

B

GGGTT

S
 .........220.........230.........240.........250.........260.........270.........280
Sequence TYNYAAPHFNSIIEAFNKGDHDAVFNKMTNVIELIRVLVEFGGVAAGKIAMELHDINAGDPRLPLMPLSA
Predicted secondary structure





















SS confidence





































































Known secondary structure (DSSP) TTT

GGGGT






TTS



 .........290.........300
Sequence EQKLTVVEKMRAANFLKHHH
Predicted secondary structure




SS confidence



















Known secondary structure (DSSP) TT


S


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


Phyre is now FREE for commercial users!

All images and data generated by Phyre2 are free to use in any publication with acknowledgement

Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
© Structural Bioinformatics Group, Imperial College, London
Michael Sternberg 
Disclaimer
Terms and Conditions
Structural Biology Group logo Imperial logo
BBSRC logo
Phyre2 is part of Genome3D