PHYRE Protein Fold Recognition Server

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Protein Homology/analogY Recognition Engine V 2.2

Fold library entry viewer: c5af0B_

Fold library id	PDB Header	Molecule	Title
c5af0B_	PDB header: unknown protein	Chain: B: PDB Molecule: maelstrom;	PDBTitle: mael domain from bombyx mori maelstrom

Links to external resources
Added to library: Sat Apr 4 08:13:27 2015

1 . . . . . . . . 10 . . . . . . . . . 20 . . . . . . . . . 30 . . . . . . . . . 40 . . . . . . . . . 50 . . . . . . . . . 60 . . . . . . . . . 70

Sequence M K N A E D N E K K D I Q N I V K L K V F D Q S I K T E D F Y V I D V N S Y C K A N G D Y L I G E F T V T Q F S L Q D G V K N S Y H E T I I

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
G G G T T T
T T T
T T T T T

. . . . . . . . . 80 . . . . . . . . . 90 . . . . . . . . . 100 . . . . . . . . . 110 . . . . . . . . . 120 . . . . . . . . . 130 . . . . . . . . . 140

Sequence P S C V P V G Y M F D V K L G A E E F G L E M P G T D D A G P N Y I Q I L A N I I D Y L K Q K D R T V Q V L P P M F T L P E K V D A V Q N F

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
S S
T T
T T
T T G G G
T T
S S
G G G

. . . . . . . . . 150 . . . . . . . . . 160 . . . . . . . . . 170 . . . . . . . . . 180 . . . . . . . . . 190 . . . . . . . . . 200 . . . . . . . . . 210

Sequence I S Q M C N C A T E D D S L F R I Y K L D T F F F T L I N A I S H H D E G F P K E S L A L T Q L T K A C E R H E S L D K S N V C T T S R V K

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) S S S
G G G
T T S S
S S T
T S

. . . . . . . . . 220 . . . . . . . . . 230 . . . . . .

Sequence R W V F T I L D R C C P L L G I P L Q P G K H L P F

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) S G G G
B T T T B

Download: PDB structure FASTA sequence
Hidden Markov model

Image coloured by rainbow N → C terminus

Interactive 3D view in JSmol

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Accessibility Statement

Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction

Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960

© Structural Bioinformatics Group, Imperial College, London

Michael Sternberg

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	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	M	K	N	A	E	D	N	E	K	K	D	I	Q	N	I	V	K	L	K	V	F	D	Q	S	I	K	T	E	D	F	Y	V	I	D	V	N	S	Y	C	K	A	N	G	D	Y	L	I	G	E	F	T	V	T	Q	F	S	L	Q	D	G	V	K	N	S	Y	H	E	T	I	I
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)		G	G	G	T																	T	T		T	T	T															T	T														T	T	T
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	P	S	C	V	P	V	G	Y	M	F	D	V	K	L	G	A	E	E	F	G	L	E	M	P	G	T	D	D	A	G	P	N	Y	I	Q	I	L	A	N	I	I	D	Y	L	K	Q	K	D	R	T	V	Q	V	L	P	P	M	F	T	L	P	E	K	V	D	A	V	Q	N	F
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)		S	S			T	T												T	T				T	T	G	G	G																			T	T			S	S									G	G	G
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	I	S	Q	M	C	N	C	A	T	E	D	D	S	L	F	R	I	Y	K	L	D	T	F	F	F	T	L	I	N	A	I	S	H	H	D	E	G	F	P	K	E	S	L	A	L	T	Q	L	T	K	A	C	E	R	H	E	S	L	D	K	S	N	V	C	T	T	S	R	V	K
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)							S	S	S			G	G	G																				T	T	S	S		S	S	T																	T	S
	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.
Sequence	R	W	V	F	T	I	L	D	R	C	C	P	L	L	G	I	P	L	Q	P	G	K	H	L	P	F
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)											S	G	G	G						B	T	T	T	B