Standard Mode | Switch to Expert Mode | Login to view past jobsRetrieve Phyre Job Id
 
Subscribe to Phyre at Google Groups
Email:
Visit Phyre at Google Groups
 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c5aexB_

Fold library idPDB HeaderMoleculeTitle
c5aexB_3.20PDB header: membrane proteinChain: B: PDB Molecule: ammonium transporter mep2;


Added to library: Sat Jan 23 08:38:55 2016
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence SYNFTGTPTGEGTGGNSLTTDLNTQFDLANMGWIGVASAGVWIMVPGIGLLYSGLSRKKHALSLLWASMM
Predicted secondary structure


























SS confidence





































































Known secondary structure (DSSP)








SSTT
S
TTTS
GGGGS
TTTT
SS

SS
TTTT
 .........80.........90.........100.........110.........120.........130.........140
Sequence ASAVCIFQWFFWGYSLAFSHNTRGNGFIGTLEFFGFRNVLGAPSSVSSLPDILFAVYQGMFAAVTGALML
Predicted secondary structure


























SS confidence





































































Known secondary structure (DSSP)
SSBSTTTSSB
STTGGGTT
SSS

SSTTS
 .........150.........160.........170.........180.........190.........200.........210
Sequence GGACERARLFPMMVFLFLWMTIVYCPIACWVWNAEGWLVKLGSLDYAGGLCVHLTSGHGGLVYALILGKR
Predicted secondary structure
























SS confidence





































































Known secondary structure (DSSP) S
TTB
TSTT
T


SSSTTTTSS
T
 .........220.........230.........240.........250.........260.........270.........280
Sequence NDPVTRKGMPKYKPHSVTSVVLGTVFLWFGWMFFNGGSAGNATIRAWYSIMSTNLAAACGGLTWMVIDYF
Predicted secondary structure





















SS confidence





































































Known secondary structure (DSSP) T
GGGSTTS
S


S
TTTSSSS
 .........290.........300.........310.........320.........330.........340.........350
Sequence RCGRKWTTVGLCSGIIAGLVGITPAAGFVPIWSAVVIGVVTGAGCNLAVDLKSLLRIDDGLDCYSIHGVG
Predicted secondary structure






















SS confidence





































































Known secondary structure (DSSP) TTS


SSTTTTTTTS
TTGGGT

SSSTT
 .........360.........370.........380.........390.........400.........410.........420
Sequence GCIGSVLTGIFAADYVNATAGSYISPIDGGWINHHYKQVGYQLAGICAALAWTVTVTSILLLTMNAIPFL
Predicted secondary structure


























SS confidence





































































Known secondary structure (DSSP)

GGG
TT






GGGT
TT
TTT
 .........430.........440.........450......
Sequence KLRLSADEEELGTDAAQIGEFTYEESTAYIPEPIRS
Predicted secondary structure

























SS confidence



































Known secondary structure (DSSP)
SB

TTT




GGGG

SSS

TT

S







Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


Phyre is now FREE for commercial users!

All images and data generated by Phyre2 are free to use in any publication with acknowledgement

Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
© Structural Bioinformatics Group, Imperial College, London
Michael Sternberg 
Disclaimer
Terms and Conditions
Structural Biology Group logo Imperial logo
BBSRC logo
Phyre2 is part of Genome3D